RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 DAB1O75553 588 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 LEFTY1O75610 366 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 PCDH8O95206 1070 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 PAK4O96013 591 aaPredicted RBP11.89□□□□□ -0.51
LIG3-207ENST00000586119 MPOP05164 745 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 CXCR3P49682 368 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 OXCT1P55809 520 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 TLE3Q04726 772 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 OVGP1Q12889 678 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 TBC1D25Q3MII6 688 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 TPRG1LQ5T0D9 272 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 CDCP2Q5VXM1 449 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 DPY19L2P1Q6NXN4 242 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 GBP6Q6ZN66 633 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 DPY19L3Q6ZPD9 716 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 Q6ZSR6 202 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 ENOSF1Q7L5Y1 443 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 SPACA3Q8IXA5 215 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 OR4C6Q8NH72 309 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 SNIP1Q8TAD8 396 aaKnown RBP11.89□□□□□ -0.51
LIG3-207ENST00000586119 GRIN3AQ8TCU5 1115 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 APOLD1Q96LR9 279 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 TBCBQ99426 244 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 SPON2Q9BUD6 331 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 MAGEB5Q9BZ81 275 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 APEX2Q9UBZ4 518 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 KLF15Q9UIH9 416 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 DNAJC12Q9UKB3 198 aa11.89□□□□□ -0.51
LIG3-207ENST00000586119 TPX2Q9ULW0 747 aaKnown RBP11.89□□□□□ -0.51
LIG3-207ENST00000586119 COL27A1Q8IZC6 1860 aaPredicted RBP11.89□□□□□ -0.51
LIG3-207ENST00000586119 A0A1W2PNU3 283 aaPredicted RBP11.88□□□□□ -0.51
LIG3-207ENST00000586119 DRGXA6NNA5 263 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 OPA1O60313 960 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 MAGEC1O60732 1142 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 SRGAP2O75044 1071 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 CD160O95971 181 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 HNRNPA2B1P22626 353 aaKnown RBP11.88□□□□□ -0.51
LIG3-207ENST00000586119 GKP32189 559 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 SULT1E1P49888 294 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 CXADRP78310 365 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 KRT83P78385 493 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 E2F1Q01094 437 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 C19orf57Q0VDD7 668 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 MAPK8IP2Q13387 824 aaPredicted RBP11.88□□□□□ -0.51
LIG3-207ENST00000586119 CAMK4Q16566 473 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 ERN2Q76MJ5 926 aaKnown RBP11.88□□□□□ -0.51
LIG3-207ENST00000586119 SLC26A9Q7LBE3 791 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 CACTIN-AS1Q8N1I8 211 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 TMIEQ8NEW7 156 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 ZNF397Q8NF99 534 aaPredicted RBP11.88□□□□□ -0.51
LIG3-207ENST00000586119 PPP1R9BQ96SB3 815 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.88□□□□□ -0.51
LIG3-207ENST00000586119 ZNF212Q9UDV6 495 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 WASF2Q9Y6W5 498 aa11.88□□□□□ -0.51
LIG3-207ENST00000586119 HELZ2Q9BYK8 2649 aaKnown RBP11.88□□□□□ -0.51
LIG3-207ENST00000586119 PMS2P1A4D2B8 440 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 K7ESM1 405 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 SPINT1O43278 529 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 ZMPSTE24O75844 475 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 CKMT1AP12532 417 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 AKT2P31751 481 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 KRT9P35527 623 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 ACTN2P35609 894 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 NUDT1P36639 197 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 ACVRL1P37023 503 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 DNA2P51530 1060 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 ARF5P84085 180 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 PTK2Q05397 1052 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 DEUP1Q05D60 604 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 FZD2Q14332 565 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 DRAP1Q14919 205 aaPredicted RBP11.87□□□□□ -0.51
LIG3-207ENST00000586119 EXOC3L4Q17RC7 722 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 TMEM259Q4ZIN3 620 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 TAF3Q5VWG9 929 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 NEK5Q6P3R8 708 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 C22orf39Q6P5X5 142 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 CRTC1Q6UUV9 634 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 GPR155Q7Z3F1 870 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 ABI3BPQ7Z7G0 1075 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 PHLDB2Q86SQ0 1253 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 ZNF843Q8N446 348 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 NETO2Q8NC67 525 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 NT5C3BQ969T7 300 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 VOPP1Q96AW1 172 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 SLC17A9Q9BYT1 436 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 CLSTN2Q9H4D0 955 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 SYNCQ9H7C4 482 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 CPNE5Q9HCH3 593 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 NDFIP2Q9NV92 336 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 DNAJC28Q9NX36 388 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 IL36AQ9UHA7 158 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 GGT7Q9UJ14 662 aa11.87□□□□□ -0.51
LIG3-207ENST00000586119 FCF1Q9Y324 198 aaKnown RBP11.87□□□□□ -0.51
LIG3-207ENST00000586119 USP12O75317 370 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 CSO75390 466 aaKnown RBP11.86□□□□□ -0.51
LIG3-207ENST00000586119 PRNPP04156 253 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 KRT10P13645 584 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 ITIH2P19823 946 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 TGM2P21980 687 aa11.86□□□□□ -0.51
LIG3-207ENST00000586119 OR1E1P30953 314 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms