RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 RALGPS2Q86X27 583 aaPredicted RBP12.91□□□□□ -0.34
VMP1-202ENST00000585847 HTR3CQ8WXA8 447 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 CASKIN2Q8WXE0 1202 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 ALG14Q96F25 216 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 RPRD1AQ96P16 312 aaPredicted RBP12.91□□□□□ -0.34
VMP1-202ENST00000585847 EIF2B3Q9NR50 452 aaKnown RBP12.91□□□□□ -0.34
VMP1-202ENST00000585847 ARHGEF3Q9NR81 526 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 GOLGA6AQ9NYA3 693 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 INTS6Q9UL03 887 aaKnown RBP12.91□□□□□ -0.34
VMP1-202ENST00000585847 TPX2Q9ULW0 747 aaKnown RBP12.91□□□□□ -0.34
VMP1-202ENST00000585847 MFHAS1Q9Y4C4 1052 aa12.91□□□□□ -0.34
VMP1-202ENST00000585847 MUC22E2RYF6 1773 aaPredicted RBP12.9□□□□□ -0.34
VMP1-202ENST00000585847 CACNA1HO95180 2353 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 A0A0A0MRY4 1105 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 A0A1B0GVM2 712 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 TCAF2A6NFQ2 919 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 PROB1E7EW31 1015 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 DNALI1O14645 258 aaPredicted RBP12.9□□□□□ -0.34
VMP1-202ENST00000585847 MFSD11O43934 449 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 CYBBP04839 570 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 AMPD1P23109 780 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 CCNCP24863 283 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 TARSP26639 723 aaKnown RBP12.9□□□□□ -0.34
VMP1-202ENST00000585847 CD70P32970 193 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 FDFT1P37268 417 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 EIF2DP41214 584 aaKnown RBP12.9□□□□□ -0.34
VMP1-202ENST00000585847 GARSP41250 739 aaKnown RBP12.9□□□□□ -0.34
VMP1-202ENST00000585847 CDH4P55283 916 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 SARNPP82979 210 aaKnown RBP12.9□□□□□ -0.34
VMP1-202ENST00000585847 SLC7A5Q01650 507 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 GBE1Q04446 702 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 PRKCQQ04759 706 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 LMAN2Q12907 356 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 SNX1Q13596 522 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 PON2Q15165 354 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 GEN1Q17RS7 908 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 TMEM196Q5HYL7 178 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 C6orf118Q5T5N4 469 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 AFMIDQ63HM1 303 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 RWDD4Q6NW29 188 aaKnown RBP12.9□□□□□ -0.34
VMP1-202ENST00000585847 SETD3Q86TU7 594 aaPredicted RBP12.9□□□□□ -0.34
VMP1-202ENST00000585847 PPIL6Q8IXY8 311 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 ATPAF2Q8N5M1 289 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 GOLGA6L1Q8N7Z2 621 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.9□□□□□ -0.34
VMP1-202ENST00000585847 TMEM105Q8N8V8 129 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 FIBINQ8TAL6 211 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 NSMCE1Q8WV22 266 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 IFT81Q8WYA0 676 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 EXOC4Q96A65 974 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 TMEM121Q9BTD3 319 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 NOL6Q9H6R4 1146 aaKnown RBP12.9□□□□□ -0.34
VMP1-202ENST00000585847 ZDHHC18Q9NUE0 388 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 ETNK2Q9NVF9 386 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 DNAJC17Q9NVM6 304 aaKnown RBP12.9□□□□□ -0.34
VMP1-202ENST00000585847 GRHL1Q9NZI5 618 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 TBC1D30Q9Y2I9 924 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 SLC27A6Q9Y2P4 619 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 MTF2Q9Y483 593 aaPredicted RBP12.9□□□□□ -0.34
VMP1-202ENST00000585847 OR51B4Q9Y5P0 310 aa12.9□□□□□ -0.34
VMP1-202ENST00000585847 NYNRINQ9P2P1 1898 aaKnown RBP12.9□□□□□ -0.34
VMP1-202ENST00000585847 ARHGAP42A6NI28 874 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 PRRT4C9JH25 899 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 KCNN4O15554 427 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 PSMD3O43242 534 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 PPFIA2O75334 1257 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 EGFP01133 1207 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 IFNB1P01574 187 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 TSHRP16473 764 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 MZF1P28698 734 aaPredicted RBP12.89□□□□□ -0.35
VMP1-202ENST00000585847 HSPA9P38646 679 aaKnown RBP12.89□□□□□ -0.35
VMP1-202ENST00000585847 RPL21P46778 160 aaKnown RBP12.89□□□□□ -0.35
VMP1-202ENST00000585847 KCNJ1P48048 391 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 CARSP49589 748 aaKnown RBP12.89□□□□□ -0.35
VMP1-202ENST00000585847 NAA30Q147X3 362 aaPredicted RBP12.89□□□□□ -0.35
VMP1-202ENST00000585847 ALS2CLQ60I27 953 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 CWF19L1Q69YN2 538 aaKnown RBP12.89□□□□□ -0.35
VMP1-202ENST00000585847 HIBCHQ6NVY1 386 aaPredicted RBP12.89□□□□□ -0.35
VMP1-202ENST00000585847 C1orf228Q6PIY5 440 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 ARHGEF18Q6ZSZ5 1173 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 TRMT10CQ7L0Y3 403 aaKnown RBP12.89□□□□□ -0.35
VMP1-202ENST00000585847 ASCL5Q7RTU5 278 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 TFAP2DQ7Z6R9 452 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 METTL3Q86U44 580 aaKnown RBP12.89□□□□□ -0.35
VMP1-202ENST00000585847 CCDC117Q8IWD4 279 aaPredicted RBP12.89□□□□□ -0.35
VMP1-202ENST00000585847 TP53INP2Q8IXH6 220 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 APCDD1Q8J025 514 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 SIX5Q8N196 739 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 CARNMT1Q8N4J0 409 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 ZCCHC9Q8N567 271 aaKnown RBP12.89□□□□□ -0.35
VMP1-202ENST00000585847 FLCNQ8NFG4 579 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 FAM3CQ92520 227 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 MSANTD3Q96H12 275 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 SPATA13Q96N96 652 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 TTC25Q96NG3 672 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 ZNF599Q96NL3 588 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 XPO6Q96QU8 1125 aaKnown RBP12.89□□□□□ -0.35
VMP1-202ENST00000585847 P2RY13Q9BPV8 354 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 TRIM51Q9BSJ1 452 aa12.89□□□□□ -0.35
VMP1-202ENST00000585847 SLC2A11Q9BYW1 496 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms