RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	NSUN2	Q08J23	767 aa	Known RBP eCLIP	3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	SLC16A12	Q6ZSM3	486 aa		3.18	□□□□□ -1.9
VAPA-208	ENST00000584796		Q6ZTK2	550 aa		3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	ZNF329	Q86UD4	541 aa		3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	ADPRHL1	Q8NDY3	354 aa		3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	DOCK7	Q96N67	2140 aa		3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	PRAM1	Q96QH2	718 aa		3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	MAGEH1	Q9H213	219 aa		3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	FSCN3	Q9NQT6	498 aa		3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	DDX21	Q9NR30	783 aa	Known RBP eCLIP	3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	PLSCR4	Q9NRQ2	329 aa		3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	NCKIPSD	Q9NZQ3	722 aa		3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	PCDHGB1	Q9Y5G3	927 aa		3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	SCN5A	Q14524	2016 aa		3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	NFAT5	O94916	1531 aa		3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	ABCC6	O95255	1503 aa		3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	CRB1	P82279	1406 aa		3.18	□□□□□ -1.9
VAPA-208	ENST00000584796	TNRC6C	Q9HCJ0	1690 aa	Known RBP	3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	NSD2	O96028	1365 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	C4A	P0C0L4	1744 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	C4B	P0C0L5	1744 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796		A0A1B0GVT2	93 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	KPNA5	O15131	536 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	ZNF432	O94892	652 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	NDST3	O95803	873 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	CYP1A2	P05177	515 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	LCK	P06239	509 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	ITGA5	P08648	1049 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	KRT10	P13645	584 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	HOXD3	P31249	432 aa	Predicted RBP	3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	PMPCA	Q10713	525 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	TRAF1	Q13077	416 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	GPR18	Q14330	331 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	MAPKAPK3	Q16644	382 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	ENTPD8	Q5MY95	495 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	WDR93	Q6P2C0	686 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	PRSS57	Q6UWY2	283 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	TCP11L2	Q8N4U5	519 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	ENGASE	Q8NFI3	743 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	GABPB2	Q8TAK5	448 aa	Predicted RBP	3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	SLC22A17	Q8WUG5	538 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	JDP2	Q8WYK2	163 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	FAR2	Q96K12	515 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	WDR77	Q9BQA1	342 aa	Predicted RBP	3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	SFXN1	Q9H9B4	322 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	RGL1	Q9NZL6	768 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	PLEKHB1	Q9UF11	243 aa	Predicted RBP	3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	FZD10	Q9ULW2	581 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	CA14	Q9ULX7	337 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	ICAM5	Q9UMF0	924 aa		3.17	□□□□□ -1.9
VAPA-208	ENST00000584796	MON2	Q7Z3U7	1717 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	CPD	O75976	1380 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	DHX57	Q6P158	1386 aa	Known RBP	3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	KCP	Q6ZWJ8	1503 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	CXorf65	A6NEN9	183 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	BTBD18	B2RXH4	712 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	NKX2-8	O15522	239 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	TAF5L	O75529	589 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	PLG	P00747	810 aa	Predicted RBP	3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	POLE2	P56282	527 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	SELENOV	P59797	346 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	KRTAP10-5	P60370	271 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	SHC2	P98077	582 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	KIF5A	Q12840	1032 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	CSHL1	Q14406	222 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	IZUMO4	Q1ZYL8	232 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	DNTTIP2	Q5QJE6	756 aa	Known RBP	3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	PRAMEF19	Q5SWL8	479 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	OTUD1	Q5VV17	481 aa	Predicted RBP	3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	MDGA2	Q7Z553	956 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	TMPRSS12	Q86WS5	348 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	CADM3	Q8N126	398 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	CCDC33	Q8N5R6	958 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	KDM1B	Q8NB78	822 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	TTC8	Q8TAM2	541 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	EIF2A	Q9BY44	585 aa	Known RBP	3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	CDT1	Q9H211	546 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	RNF146	Q9NTX7	359 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	TCEAL9	Q9UHQ7	104 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	KCNG2	Q9UJ96	466 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	MYH14	Q7Z406	1995 aa	Known RBP	3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	CASP8AP2	Q9UKL3	1982 aa		3.16	□□□□□ -1.9
VAPA-208	ENST00000584796	AFDN	P55196	1824 aa	Known RBP	3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	LOC105369274	A0A096LPK9	316 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	LOC102723532	A0A0G2JNH3	316 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	SMTNL1	A8MU46	457 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	KCNJ18	B7U540	433 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796		J3KTA2	159 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	MSI1	O43347	362 aa	Known RBP	3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	PQBP1	O60828	265 aa	Known RBP	3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	LDB3	O75112	727 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	CAMTA2	O94983	1202 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	GLUD1	P00367	558 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	ALDOC	P09972	364 aa	Known RBP	3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	SRGAP2B	P0DMP2	458 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	HSPA1A	P0DMV8	641 aa	Known RBP	3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	HSPA1B	P0DMV9	641 aa	Known RBP	3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	GLUD2	P49448	558 aa		3.15	□□□□□ -1.91
VAPA-208	ENST00000584796	COMP	P49747	757 aa	Predicted RBP	3.15	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms