RNA–Protein interactions for RNA: ENST00000583667.1

GGA3-217, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-217ENST00000583667 C2orf42Q9NWW7 574 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 PCDHGA5Q9Y5G8 931 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 HS3ST4Q9Y661 456 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 F5P12259 2224 aa12.23□□□□□ -0.45
GGA3-217ENST00000583667 AGPSO00116 658 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 CHADO15335 359 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 KCNN4O15554 427 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 MSI1O43347 362 aaKnown RBP12.22□□□□□ -0.45
GGA3-217ENST00000583667 LATS1O95835 1130 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 OLFM2O95897 454 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 TBX18O95935 607 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 OAS1P00973 400 aaKnown RBP12.22□□□□□ -0.45
GGA3-217ENST00000583667 IFNB1P01574 187 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 POU2F2P09086 479 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 ETS1P14921 441 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 RHOQP17081 205 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 HOXA6P31267 233 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 ACTN2P35609 894 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 MPLP40238 635 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 PMS2P54278 862 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 EIF3BP55884 814 aaKnown RBP12.22□□□□□ -0.45
GGA3-217ENST00000583667 CDK16Q00536 496 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 PPIDQ08752 370 aaKnown RBP12.22□□□□□ -0.45
GGA3-217ENST00000583667 C19orf57Q0VDD7 668 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 TWF1Q12792 350 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 UAP1Q16222 522 aaPredicted RBP12.22□□□□□ -0.45
GGA3-217ENST00000583667 TANGO2Q6ICL3 276 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 POTEHQ6S545 545 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 UMODL1-AS1Q8N2C9 162 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 MCUQ8NE86 351 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 CPT1BQ92523 772 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 PLD4Q96BZ4 506 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 ZNF512Q96ME7 567 aaPredicted RBP12.22□□□□□ -0.45
GGA3-217ENST00000583667 GDAP1L1Q96MZ0 367 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 VAT1Q99536 393 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 EDEM2Q9BV94 578 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 TMEM109Q9BVC6 243 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 LRRC3Q9BY71 257 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 IL21Q9HBE4 155 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 STOML2Q9UJZ1 356 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 NFS1Q9Y697 457 aa12.22□□□□□ -0.45
GGA3-217ENST00000583667 ZNF638Q14966 1978 aaKnown RBP12.21□□□□□ -0.45
GGA3-217ENST00000583667 MTCL1Q9Y4B5 1905 aaKnown RBP12.21□□□□□ -0.45
GGA3-217ENST00000583667 A0A0A0MRY4 1105 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 SLC12A8A0AV02 714 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 GOLGA6BA6NDN3 693 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 E7ESA3 106 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 E9PAM4 449 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 ALOX15BO15296 676 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 MFSD11O43934 449 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 OPA1O60313 960 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 OPHN1O60890 802 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 STK10O94804 968 aaKnown RBP12.21□□□□□ -0.45
GGA3-217ENST00000583667 HNRNPA1P09651 372 aaKnown RBP eCLIP12.21□□□□□ -0.45
GGA3-217ENST00000583667 TSHRP16473 764 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 CCNCP24863 283 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 HOXA9P31269 272 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 NDST2P52849 883 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 AUHQ13825 339 aaKnown RBP12.21□□□□□ -0.45
GGA3-217ENST00000583667 MS4A13Q5J8X5 152 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 PIK3R6Q5UE93 754 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 LRRC31Q6UY01 552 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 CROCCP2Q86T23 111 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 TMEM150AQ86TG1 271 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 NLRP14Q86W24 1093 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 KLHDC8BQ8IXV7 354 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 RTL3Q8N8U3 475 aaKnown RBP12.21□□□□□ -0.45
GGA3-217ENST00000583667 GAB3Q8WWW8 586 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 PRCCQ92733 491 aaPredicted RBP12.21□□□□□ -0.45
GGA3-217ENST00000583667 SPATA13Q96N96 652 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 KLF16Q9BXK1 252 aaPredicted RBP12.21□□□□□ -0.45
GGA3-217ENST00000583667 EPB41L4BQ9H329 900 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 CCSER2Q9H7U1 834 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 TMEM248Q9NWD8 314 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 NUDT5Q9UKK9 219 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 TRHDEQ9UKU6 1024 aa12.21□□□□□ -0.45
GGA3-217ENST00000583667 MAGED2Q9UNF1 606 aaPredicted RBP12.21□□□□□ -0.45
GGA3-217ENST00000583667 FAM221BA6H8Z2 402 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 CCL16O15467 120 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 COCHO43405 550 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 FGF19O95750 216 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 SYF2O95926 243 aaKnown RBP12.2□□□□□ -0.46
GGA3-217ENST00000583667 TPSB2P20231 275 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 FDFT1P37268 417 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 GARSP41250 739 aaKnown RBP12.2□□□□□ -0.46
GGA3-217ENST00000583667 EPHA5P54756 1037 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 WASHC5Q12768 1159 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 SEMA5AQ13591 1074 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 KCNJ11Q14654 390 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 TPSAB1Q15661 275 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 TAF12Q16514 161 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 PARP6Q2NL67 630 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 PPP1R21Q6ZMI0 780 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 C14orf80Q86SX3 495 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 PRUNE1Q86TP1 453 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 ARHGAP12Q8IWW6 846 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 KRT222Q8N1A0 295 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 ZSCAN18Q8TBC5 510 aaPredicted RBP12.2□□□□□ -0.46
GGA3-217ENST00000583667 ING5Q8WYH8 240 aa12.2□□□□□ -0.46
GGA3-217ENST00000583667 ELSPBP1Q96BH3 223 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms