RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 RENBPP51606 427 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 NRLP54845 237 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 TUBB4BP68371 445 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 PFKPQ01813 784 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 SULT2A1Q06520 285 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 MESP2Q0VG99 397 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 PREPLQ4J6C6 727 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 FAM182AQ5T1J6 154 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 MBLAC2Q68D91 279 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 NAIF1Q69YI7 327 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 RETSATQ6NUM9 610 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 LEKR1Q6ZMV7 388 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 SYDE1Q6ZW31 735 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 PRUNE1Q86TP1 453 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 GLIS1Q8NBF1 620 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 NSMCE1Q8WV22 266 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 VAT1Q99536 393 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 SEPT10Q9P0V9 454 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 UBA2Q9UBT2 640 aaPredicted RBP16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ACTL7AQ9Y615 435 aa16.66■□□□□ 0.26
CDK5RAP3-228ENST00000583363 RIF1Q5UIP0 2472 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 SPECC1L-ADORA2AF8WAN1 911 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 RNF103O00237 685 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 GAS8O95995 478 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 IFNB1P01574 187 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ZSCAN5DPP0CG00 497 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 GLULP15104 373 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 RPL22P35268 128 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 NBL1P41271 181 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 CTSOP43234 321 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 SLC10A7Q0GE19 358 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ZBTB17Q13105 803 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 RFTN1Q14699 578 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 LBRQ14739 615 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 CYTH1Q15438 398 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 KCTD19Q17RG1 926 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 P3H1Q32P28 736 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 INO80DQ53TQ3 878 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ANKRD20A2Q5SQ80 823 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ANKRD20A1Q5TYW2 823 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 MARC1Q5VT66 337 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ANKRD20A3Q5VUR7 823 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 LINGO4Q6UY18 593 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 RALGPS2Q86X27 583 aaPredicted RBP16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 JAMLQ86YT9 394 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ZNF567Q8N184 647 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 CNTD1Q8N815 330 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 CCDC89Q8N998 374 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 USP33Q8TEY7 942 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 TEKT5Q96M29 485 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 FBRSL1Q9HCM7 1045 aaKnown RBP16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 RBM22Q9NW64 420 aaKnown RBP eCLIP16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 ELOVL2Q9NXB9 296 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 TRHDEQ9UKU6 1024 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 FAM186AA6NE01 2351 aa16.65■□□□□ 0.26
CDK5RAP3-228ENST00000583363 SHROOM3Q8TF72 1996 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 PRR23AA6NEV1 266 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 PRRT4C9JH25 899 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 STK10O94804 968 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 KAT7O95251 611 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 MT-CO1P00395 513 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 CTHP32929 405 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 GRIA2P42262 883 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 VASPP50552 380 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 GEMIN4P57678 1058 aaKnown RBP16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ECT2LQ008S8 904 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 KDSRQ06136 332 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 PTK6Q13882 451 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 PPP1R7Q15435 360 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 TRIP13Q15645 432 aaPredicted RBP16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SLC44A4Q53GD3 710 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 TMCO4Q5TGY1 634 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 C8orf74Q6P047 294 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 PID1Q7Z2X4 250 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 CCDC110Q8TBZ0 833 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 CASKIN2Q8WXE0 1202 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SPATA13Q96N96 652 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 P2RY13Q9BPV8 354 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 PCDH9Q9HC56 1237 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 HEBP1Q9NRV9 189 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 DUSP12Q9UNI6 340 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ATP8A1Q9Y2Q0 1164 aa16.64■□□□□ 0.25
CDK5RAP3-228ENST00000583363 TBC1D3BA6NDS4 549 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ZBTB24O43167 697 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 OPHN1O60890 802 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ASLP04424 464 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 APODP05090 189 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ATP5BP06576 529 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 CD68P34810 354 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 MMP13P45452 471 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 CLCN5P51795 746 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 SLC7A5Q01650 507 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 TEX35Q5T0J7 233 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 CWF19L1Q69YN2 538 aaKnown RBP16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 TXNDC11Q6PKC3 985 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 C4orf22Q6V702 233 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 TERB1Q8NA31 727 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ZNF419Q96HQ0 510 aaPredicted RBP16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 AGAP3Q96P47 875 aa16.63■□□□□ 0.25
CDK5RAP3-228ENST00000583363 ERP44Q9BS26 406 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms