RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 USP29Q9HBJ7 922 aa13.89□□□□□ -0.19
SS18-222ENST00000582792 CPNE5Q9HCH3 593 aa13.89□□□□□ -0.19
SS18-222ENST00000582792 UBE2TQ9NPD8 197 aaPredicted RBP13.89□□□□□ -0.19
SS18-222ENST00000582792 ACP6Q9NPH0 428 aa13.89□□□□□ -0.19
SS18-222ENST00000582792 ZFR2Q9UPR6 939 aaKnown RBP13.89□□□□□ -0.19
SS18-222ENST00000582792 U3KQA8 63 aa13.89□□□□□ -0.19
SS18-222ENST00000582792 COL6A6A6NMZ7 2263 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 NEMP2A6NFY4 417 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 A6NNZ2 444 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 J3QKU1 62 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 SCAMP1O15126 338 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 LZTS3O60299 673 aaPredicted RBP13.88□□□□□ -0.19
SS18-222ENST00000582792 HSF2BPO75031 334 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 CSO75390 466 aaKnown RBP13.88□□□□□ -0.19
SS18-222ENST00000582792 AFPP02771 609 aaKnown RBP13.88□□□□□ -0.19
SS18-222ENST00000582792 PRNPP04156 253 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 MYF5P13349 255 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 GGCXP38435 758 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 DUSP3P51452 185 aaPredicted RBP13.88□□□□□ -0.19
SS18-222ENST00000582792 CDH4P55283 916 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 CLDN2P57739 230 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 KRT83P78385 493 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 TMEM259Q4ZIN3 620 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 ARHGAP40Q5TG30 622 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 ERN2Q76MJ5 926 aaKnown RBP13.88□□□□□ -0.19
SS18-222ENST00000582792 C14orf80Q86SX3 495 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 DCP2Q8IU60 420 aaKnown RBP13.88□□□□□ -0.19
SS18-222ENST00000582792 FAM114A1Q8IWE2 563 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 CPXM1Q96SM3 734 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 PSMB7Q99436 277 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 C2orf49Q9BVC5 232 aaPredicted RBP13.88□□□□□ -0.19
SS18-222ENST00000582792 DUSP23Q9BVJ7 150 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 DPH1Q9BZG8 443 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 NAT10Q9H0A0 1025 aaKnown RBP13.88□□□□□ -0.19
SS18-222ENST00000582792 ASCL3Q9NQ33 180 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 DYRK4Q9NR20 520 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 EVA1BQ9NVM1 165 aa13.88□□□□□ -0.19
SS18-222ENST00000582792 MYO18BQ8IUG5 2567 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 PIEZO2Q9H5I5 2752 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 K7ERQ8 282 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 K7ESM1 405 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 RNF103O00237 685 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 KLK10O43240 276 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 SNAP91O60641 907 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 PAGE1O75459 146 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 GRAP2O75791 330 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 PCDH8O95206 1070 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 RHOCP08134 193 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 CLCN6P51797 869 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 HNRNPKP61978 463 aaKnown RBP eCLIP13.87□□□□□ -0.19
SS18-222ENST00000582792 NME3Q13232 169 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 TPD52L1Q16890 204 aaPredicted RBP13.87□□□□□ -0.19
SS18-222ENST00000582792 ZSCAN23Q3MJ62 389 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 SEL1L3Q68CR1 1132 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 IGF2-ASQ6U949 168 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 Q6ZSR6 202 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 ENOSF1Q7L5Y1 443 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 PIAS4Q8N2W9 510 aaPredicted RBP13.87□□□□□ -0.19
SS18-222ENST00000582792 WDTC1Q8N5D0 677 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 IFI44Q8TCB0 444 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 SNRNP27Q8WVK2 155 aaKnown RBP13.87□□□□□ -0.19
SS18-222ENST00000582792 KCNE4Q8WWG9 221 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 PPP1R13BQ96KQ4 1090 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 HDAC8Q9BY41 377 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 ABCG4Q9H172 646 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 THSD1Q9NS62 852 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 GPR27Q9NS67 375 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 DNAJC28Q9NX36 388 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 VPS51Q9UID3 782 aa13.87□□□□□ -0.19
SS18-222ENST00000582792 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.87□□□□□ -0.19
SS18-222ENST00000582792 SMAD6O43541 496 aaKnown RBP13.86□□□□□ -0.19
SS18-222ENST00000582792 DAB1O75553 588 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 CNTN5O94779 1100 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 RRM1P23921 792 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 ISXQ2M1V0 245 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 ALFQ53S48 1182 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 ZNF542PQ5EBM4 170 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 ARSIQ5FYB1 569 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 OR6B2Q6IFH4 312 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 OLFML1Q6UWY5 402 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 KYAT3Q6YP21 454 aaKnown RBP13.86□□□□□ -0.19
SS18-222ENST00000582792 C11orf57Q6ZUT1 292 aaPredicted RBP13.86□□□□□ -0.19
SS18-222ENST00000582792 FAM183BPQ6ZVS7 135 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 PTAR1Q7Z6K3 402 aaPredicted RBP13.86□□□□□ -0.19
SS18-222ENST00000582792 IRF2BP1Q8IU81 584 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 DCAF4L2Q8NA75 395 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 CHST14Q8NCH0 376 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 MAPK15Q8TD08 544 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 PPP1R16AQ96I34 528 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 VCPIP1Q96JH7 1222 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 BMFQ96LC9 184 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 SIK2Q9H0K1 926 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 OSBPL2Q9H1P3 480 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 IL36AQ9UHA7 158 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 SSUH2Q9Y2M2 353 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 HS3ST3A1Q9Y663 406 aa13.86□□□□□ -0.19
SS18-222ENST00000582792 COL27A1Q8IZC6 1860 aaPredicted RBP13.86□□□□□ -0.19
SS18-222ENST00000582792 BOD1L1Q8NFC6 3051 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 SYCE3A1L190 88 aa13.85□□□□□ -0.19
SS18-222ENST00000582792 POM121BA6NF01 834 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms