RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 MGARPQ8TDB4 240 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 BCAS4Q8TDM0 211 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 MRPS31Q92665 395 aaKnown RBP9.47□□□□□ -0.89
SS18-220ENST00000582092 CENPTQ96BT3 561 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 ALKBH8Q96BT7 664 aaKnown RBP9.47□□□□□ -0.89
SS18-220ENST00000582092 TRMT2BQ96GJ1 504 aaKnown RBP9.47□□□□□ -0.89
SS18-220ENST00000582092 PAFAH2Q99487 392 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 PAIP2Q9BPZ3 127 aaKnown RBP9.47□□□□□ -0.89
SS18-220ENST00000582092 FSD1LQ9BXM9 530 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 IQCGQ9H095 443 aaKnown RBP9.47□□□□□ -0.89
SS18-220ENST00000582092 EPN3Q9H201 632 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 CRISPLD1Q9H336 500 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 MAN1C1Q9NR34 630 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 TMEM248Q9NWD8 314 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 ZDHHC7Q9NXF8 308 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 IPO11Q9UI26 975 aaKnown RBP9.47□□□□□ -0.89
SS18-220ENST00000582092 SMG5Q9UPR3 1016 aaKnown RBP9.47□□□□□ -0.89
SS18-220ENST00000582092 INSL5Q9Y5Q6 135 aa9.47□□□□□ -0.89
SS18-220ENST00000582092 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.46□□□□□ -0.9
SS18-220ENST00000582092 TMEM120BA0PK00 339 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 SRRM3A6NNA2 597 aaPredicted RBP9.46□□□□□ -0.9
SS18-220ENST00000582092 DRGXA6NNA5 263 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 LOC730098B7Z3J9 87 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 I6L893 689 aaPredicted RBP9.46□□□□□ -0.9
SS18-220ENST00000582092 GPR37L1O60883 481 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 VNN2O95498 520 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 VIMP08670 466 aaKnown RBP9.46□□□□□ -0.9
SS18-220ENST00000582092 MGAT1P26572 445 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 ETFBP38117 255 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 IL9RQ01113 521 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 CDH17Q12864 832 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 ZNF177Q13360 481 aaPredicted RBP9.46□□□□□ -0.9
SS18-220ENST00000582092 SPARCL1Q14515 664 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 KBTBD12Q3ZCT8 623 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 MANEALQ5VSG8 457 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 SNX30Q5VWJ9 437 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 IL31Q6EBC2 164 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 FBXL22Q6P050 247 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 ADGRD1Q6QNK2 874 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 TMC5Q6UXY8 1006 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 SLC26A11Q86WA9 606 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 DENND1CQ8IV53 801 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 UMODL1-AS1Q8N2C9 162 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 TDRD5Q8NAT2 981 aaKnown RBP9.46□□□□□ -0.9
SS18-220ENST00000582092 KREMEN2Q8NCW0 462 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 TTC16Q8NEE8 873 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 MDM1Q8TC05 714 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 AZIN2Q96A70 460 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 MYRFLQ96LU7 910 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 FAM107BQ9H098 131 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 EPHX3Q9H6B9 360 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 GLOD4Q9HC38 313 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 CD320Q9NPF0 282 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 CTNNAL1Q9UBT7 734 aa9.46□□□□□ -0.9
SS18-220ENST00000582092 DENND4AQ7Z401 1863 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 CCDC195A0A1B0GUA6 201 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 TCRBV9S1A1TA0A576 114 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 FAM47DPA6NHR8 397 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 EBAG9O00559 213 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 COCHO43405 550 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 ATP9BO43861 1147 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 MAFKO60675 156 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 XYLBO75191 536 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 CLDN11O75508 207 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 FGF19O95750 216 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 SNRPAP09012 282 aaKnown RBP9.45□□□□□ -0.9
SS18-220ENST00000582092 HNRNPA1P09651 372 aaKnown RBP eCLIP9.45□□□□□ -0.9
SS18-220ENST00000582092 SPATA31D3P0C874 917 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 HDCP19113 662 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 CA4P22748 312 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 CNTFP26441 200 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 CDH4P55283 916 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 IL10RBQ08334 325 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 DMTNQ08495 405 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 CBLBQ13191 982 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 MPP3Q13368 585 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 NAB1Q13506 487 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 HNRNPDQ14103 355 aaKnown RBP9.45□□□□□ -0.9
SS18-220ENST00000582092 ZNF235Q14590 738 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 ZSCAN26Q16670 478 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 SPANXN3Q5MJ09 141 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 PPM1LQ5SGD2 360 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 UBAP2Q5T6F2 1119 aaKnown RBP9.45□□□□□ -0.9
SS18-220ENST00000582092 UNC5AQ6ZN44 842 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 SPATA31D4Q6ZUB0 917 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 RASSF3Q86WH2 238 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 IGDCC3Q8IVU1 814 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 TP53INP2Q8IXH6 220 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 C12orf76Q8N812 135 aaPredicted RBP9.45□□□□□ -0.9
SS18-220ENST00000582092 PPHLN1Q8NEY8 458 aaKnown RBP9.45□□□□□ -0.9
SS18-220ENST00000582092 OR52K1Q8NGK4 314 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 SMG7Q92540 1137 aaKnown RBP9.45□□□□□ -0.9
SS18-220ENST00000582092 PSMG2Q969U7 264 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 MTBPQ96DY7 904 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 SGSM3Q96HU1 749 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 SIGLEC10Q96LC7 697 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 FCRL5Q96RD9 977 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 TBL1YQ9BQ87 522 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 SPON2Q9BUD6 331 aa9.45□□□□□ -0.9
SS18-220ENST00000582092 IL22Q9GZX6 179 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms