RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 CPA5Q8WXQ8 436 aa14.82□□□□□ -0.04
SMARCE1-216ENST00000580419 TSC1Q92574 1164 aa14.82□□□□□ -0.04
SMARCE1-216ENST00000580419 MAGEH1Q9H213 219 aa14.82□□□□□ -0.04
SMARCE1-216ENST00000580419 TMEM248Q9NWD8 314 aa14.82□□□□□ -0.04
SMARCE1-216ENST00000580419 TAB2Q9NYJ8 693 aa14.82□□□□□ -0.04
SMARCE1-216ENST00000580419 FTSJ1Q9UET6 329 aa14.82□□□□□ -0.04
SMARCE1-216ENST00000580419 OR12D3Q9UGF7 316 aa14.82□□□□□ -0.04
SMARCE1-216ENST00000580419 MYO6Q9UM54 1294 aa14.82□□□□□ -0.04
SMARCE1-216ENST00000580419 CELSR3Q9NYQ7 3312 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 A0A0D9SEW6 157 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 ZSCAN5CA6NGD5 496 aaPredicted RBP14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 GOLGA6L22H0YM25 854 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 RTN2O75298 545 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 ZNF821O75541 412 aaPredicted RBP14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 CALB1P05937 261 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 CTSLP07711 333 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 RHOQP17081 205 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 HTR7P34969 479 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 PPP2CBP62714 309 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 PPP2CAP67775 309 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 GNA12Q03113 381 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 STAT4Q14765 748 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 HSP90AA4PQ58FG1 418 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 TAF3Q5VWG9 929 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 ERN2Q76MJ5 926 aaKnown RBP14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 NLRP14Q86W24 1093 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 HORMAD1Q86X24 394 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 C3orf20Q8ND61 904 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 CASKIN2Q8WXE0 1202 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 RAB7BQ96AH8 199 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 VCPIP1Q96JH7 1222 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 CFAP57Q96MR6 1250 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 VPS16Q9H269 839 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 DYRK4Q9NR20 520 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 FAM207AQ9NSI2 230 aaPredicted RBP14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 FANCLQ9NW38 375 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 DONSONQ9NYP3 566 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 IL36AQ9UHA7 158 aa14.81□□□□□ -0.04
SMARCE1-216ENST00000580419 SIGLEC16A6NMB1 481 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 EIF3CLB5ME19 914 aaKnown RBP14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 SNAP91O60641 907 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 GFPT2O94808 682 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 MBD3O95983 291 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 ITGAVP06756 1048 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 KRT3P12035 628 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 ITGB7P26010 798 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 NSFP46459 744 aaKnown RBP14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 COPB1P53618 953 aaKnown RBP14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 CAMK2BQ13554 666 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 STX1AQ16623 288 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 ZNF284Q2VY69 593 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 CCDC14Q49A88 953 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 TMEM259Q4ZIN3 620 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 KIAA1161Q6NSJ0 714 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 SASS6Q6UVJ0 657 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 LAYNQ6UX15 382 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 FAM131BQ86XD5 332 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 PDCD7Q8N8D1 485 aaKnown RBP14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 PNPLA1Q8N8W4 532 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 GPT2Q8TD30 523 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 RXFP2Q8WXD0 754 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 EIF3CQ99613 913 aaKnown RBP14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 CCDC86Q9H6F5 360 aaKnown RBP14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 METTL5Q9NRN9 209 aaKnown RBP14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 GPR27Q9NS67 375 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 KLHL11Q9NVR0 708 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 MPP6Q9NZW5 540 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 HS3ST3A1Q9Y663 406 aa14.8□□□□□ -0.04
SMARCE1-216ENST00000580419 TCRBV5S1A1TA0A578 114 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 GOLGA8SH3BPF8 625 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 ENC1O14682 589 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 WNT9AO14904 365 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 SMAD6O43541 496 aaKnown RBP14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 LDOC1O95751 146 aaPredicted RBP14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 HNRNPA2B1P22626 353 aaKnown RBP14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 L1CAMP32004 1257 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 GGCXP38435 758 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 NEK3P51956 506 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 METAP1P53582 386 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 HDAC4P56524 1084 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 ARF5P84085 180 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 SYCP1Q15431 976 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 CLEC16AQ2KHT3 1053 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 INO80DQ53TQ3 878 aaPredicted RBP14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 CARD16Q5EG05 197 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 DPY19L3Q6ZPD9 716 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 APTXQ7Z2E3 356 aaKnown RBP14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 TFAP2DQ7Z6R9 452 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 ABI3BPQ7Z7G0 1075 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 SPATS2Q86XZ4 545 aaKnown RBP14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 NEK11Q8NG66 645 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 SLC20A1Q8WUM9 679 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 RFFLQ8WZ73 363 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 ARHGEF26Q96DR7 871 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 KLHDC7BQ96G42 594 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 LENG8Q96PV6 779 aaPredicted RBP14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 HEPHQ9BQS7 1158 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 OSBPL1AQ9BXW6 950 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 ATP13A1Q9HD20 1204 aa14.79□□□□□ -0.04
SMARCE1-216ENST00000580419 SCUBE2Q9NQ36 999 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms