RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 CPLX3Q8WVH0 158 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 TFAP2BQ92481 460 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 JAKMIP2Q96AA8 810 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 FUBP3Q96I24 572 aaKnown RBP eCLIP3.52□□□□□ -1.85
CDH19-204ENST00000579658 XPO6Q96QU8 1125 aaKnown RBP3.52□□□□□ -1.85
CDH19-204ENST00000579658 SMOQ99835 787 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 SMG9Q9H0W8 520 aaKnown RBP3.52□□□□□ -1.85
CDH19-204ENST00000579658 ERVMER34-1Q9H9K5 563 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 SCHIP1Q9P0W5 487 aaPredicted RBP3.52□□□□□ -1.85
CDH19-204ENST00000579658 WDR35Q9P2L0 1181 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 RABGEF1Q9UJ41 708 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 CDH9Q9ULB4 789 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 CAPN11Q9UMQ6 739 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 ANKRD6Q9Y2G4 727 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 A0A1W2PQF6 199 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 TBC1D3BA6NDS4 549 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 F8VP50 259 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 FOXN3O00409 490 aaPredicted RBP3.52□□□□□ -1.85
CDH19-204ENST00000579658 PIK3R2O00459 728 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 VILLO15195 856 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 KLK10O43240 276 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 KATNA1O75449 491 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 FGFR1OPO95684 399 aaKnown RBP3.52□□□□□ -1.85
CDH19-204ENST00000579658 MT-CO3P00414 261 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 ITGAVP06756 1048 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 GP1BAP07359 652 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 ABCB4P21439 1286 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 EEF1GP26641 437 aaKnown RBP3.52□□□□□ -1.85
CDH19-204ENST00000579658 CD27P26842 260 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 RBMS1P29558 406 aaKnown RBP3.52□□□□□ -1.85
CDH19-204ENST00000579658 KRT9P35527 623 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 LHX1P48742 406 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 ARRB1P49407 418 aaPredicted RBP3.52□□□□□ -1.85
CDH19-204ENST00000579658 MMP16P51512 607 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 OXCT1P55809 520 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 CDK17Q00537 523 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 BNC1Q01954 994 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 ENPEPQ07075 957 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 INCA1Q0VD86 236 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 IFRD2Q12894 506 aaPredicted RBP3.52□□□□□ -1.85
CDH19-204ENST00000579658 EXOC3L4Q17RC7 722 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 ARL13BQ3SXY8 428 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 TXNDC8Q6A555 127 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 WDR59Q6PJI9 974 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 TMEM270Q6UE05 265 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 GBP6Q6ZN66 633 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 LHFPL2Q6ZUX7 228 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 SRLQ86TD4 932 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 ZNF295-AS1Q8N0V1 137 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 FUKQ8N0W3 1084 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 CRYBG2Q8N1P7 616 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 ZSCAN1Q8NBB4 408 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 ACRBPQ8NEB7 543 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 ANKRD20A12PQ8NF67 263 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 SCAMP5Q8TAC9 235 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 WDR48Q8TAF3 677 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 UBA3Q8TBC4 463 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 MYCBPAPQ8TBZ2 947 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 SLC2A14Q8TDB8 520 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 STON2Q8WXE9 905 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 OVCA2Q8WZ82 227 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 NDRG1Q92597 394 aaKnown RBP3.52□□□□□ -1.85
CDH19-204ENST00000579658 SPATA17Q96L03 361 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 HEXIM2Q96MH2 286 aaKnown RBP3.52□□□□□ -1.85
CDH19-204ENST00000579658 NT5C1BQ96P26 610 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 TTYH3Q9C0H2 523 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 GANQ9H2C0 597 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 IL21RQ9HBE5 538 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 CPNE5Q9HCH3 593 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 NLRC4Q9NPP4 1024 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 GMIPQ9P107 970 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 PFDN2Q9UHV9 154 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 DNAJC12Q9UKB3 198 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 ATXN7L1Q9ULK2 861 aaPredicted RBP3.52□□□□□ -1.85
CDH19-204ENST00000579658 PHTF1Q9UMS5 762 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 MAGED2Q9UNF1 606 aaPredicted RBP3.52□□□□□ -1.85
CDH19-204ENST00000579658 TLR6Q9Y2C9 796 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 BTBD3Q9Y2F9 522 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 SIK3Q9Y2K2 1263 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 REXO2Q9Y3B8 237 aaKnown RBP3.52□□□□□ -1.85
CDH19-204ENST00000579658 PCDHB4Q9Y5E5 795 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 PCDHGA8Q9Y5G5 932 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 TMEM131Q92545 1883 aa3.52□□□□□ -1.85
CDH19-204ENST00000579658 PTPN13Q12923 2485 aa3.51□□□□□ -1.85
CDH19-204ENST00000579658 A0A1B0GVT2 93 aa3.51□□□□□ -1.85
CDH19-204ENST00000579658 HHLA1C9JL84 531 aa3.51□□□□□ -1.85
CDH19-204ENST00000579658 MYO1CO00159 1063 aa3.51□□□□□ -1.85
CDH19-204ENST00000579658 LEFTY2O00292 366 aa3.51□□□□□ -1.85
CDH19-204ENST00000579658 IFRD1O00458 451 aaPredicted RBP3.51□□□□□ -1.85
CDH19-204ENST00000579658 PMM2O15305 246 aa3.51□□□□□ -1.85
CDH19-204ENST00000579658 PDPK1O15530 556 aa3.51□□□□□ -1.85
CDH19-204ENST00000579658 OLFM2O95897 454 aa3.51□□□□□ -1.85
CDH19-204ENST00000579658 SYF2O95926 243 aaKnown RBP3.51□□□□□ -1.85
CDH19-204ENST00000579658 ACADMP11310 421 aa3.51□□□□□ -1.85
CDH19-204ENST00000579658 PRLRP16471 622 aa3.51□□□□□ -1.85
CDH19-204ENST00000579658 HDCP19113 662 aa3.51□□□□□ -1.85
CDH19-204ENST00000579658 PCSK1P29120 753 aa3.51□□□□□ -1.85
CDH19-204ENST00000579658 EIF4A3P38919 411 aaKnown RBP3.51□□□□□ -1.85
CDH19-204ENST00000579658 GRIK1P39086 918 aa3.51□□□□□ -1.85
CDH19-204ENST00000579658 USP8P40818 1118 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms