RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 ST6GALNAC4Q9H4F1 302 aa12.2□□□□□ -0.46
ERBB2-206ENST00000578373 ATXN2Q99700 1313 aaKnown RBP12.2□□□□□ -0.46
ERBB2-206ENST00000578373 SPDYE5A6NIY4 337 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 FFAR3O14843 346 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 GPR42O15529 346 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 MTA2O94776 668 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 PSMB9P28065 219 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 EPHX2P34913 555 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 SLC11A2P49281 568 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 SLC7A2P52569 658 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 SP2Q02086 613 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 BFSP2Q13515 415 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 ARL13AQ5H913 290 aaPredicted RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 RAP1GAP2Q684P5 730 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 ARCQ7LC44 396 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 ARHGAP22Q7Z5H3 698 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 ATG16L2Q8NAA4 619 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 HDAC10Q969S8 669 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 HSFY1Q96LI6 401 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 RBBP8Q99708 897 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 CIB1Q99828 191 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 ARMC7Q9H6L4 198 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 KCPQ6ZWJ8 1503 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 NRXN3Q9Y4C0 1643 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 MT-CYBP00156 380 aaPredicted RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 LDLRP01130 860 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 RHOCP08134 193 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 LMO2P25791 158 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 CRABP2P29373 138 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 ARL2P36404 184 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 HADHBP55084 474 aaKnown RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 SLC5A9Q2M3M2 681 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 SPDYE7PQ495Y7 208 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 FAM171A1Q5VUB5 890 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 ELMOD1Q8N336 334 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 ZNF781Q8N8C0 355 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 BANPQ8N9N5 519 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 SLC16A10Q8TF71 515 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 GLT1D1Q96MS3 346 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 SLC25A23Q9BV35 468 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 SYTL2Q9HCH5 934 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 FARP1Q9Y4F1 1045 aaPredicted RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 FAM149AA5PLN7 773 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 GPR182O15218 404 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 HCRTO43612 131 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 B4GALT4O60513 344 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 NPM3O75607 178 aaKnown RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 AMHP03971 560 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 ABCB1P08183 1280 aaPredicted RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 ECHS1P30084 290 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 RHOAP61586 193 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 MTX3Q5HYI7 312 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 PITRM1Q5JRX3 1037 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 TMEM198Q66K66 360 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 LRRC8DQ7L1W4 858 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 KLRG1Q96E93 195 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 ADAM2Q99965 735 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 PIDD1Q9HB75 910 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 ATP13A1Q9HD20 1204 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 CHCHD3Q9NX63 227 aaKnown RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 SCN3BQ9NY72 215 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 COPG2Q9UBF2 871 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 VTI1BQ9UEU0 232 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 EIF3LQ9Y262 564 aaKnown RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 MYO18AQ92614 2054 aaKnown RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 PTPRJQ12913 1337 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 TIPRLO75663 272 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 TM7SF2O76062 418 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 APOA1P02647 267 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 PBLDP30039 288 aaPredicted RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 SERPINB10P48595 397 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 SERPINH1P50454 418 aaKnown RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 ZC3H12BQ5HYM0 836 aaKnown RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 SAMD4BQ5PRF9 694 aaKnown RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 LCLAT1Q6UWP7 414 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 CENPLQ8N0S6 344 aaPredicted RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 LGI2Q8N0V4 545 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 DHRSXQ8N5I4 330 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 WDR60Q8WVS4 1066 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 C10orf82Q8WW14 230 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 LENG1Q96BZ8 264 aaPredicted RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 NXNL1Q96CM4 212 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 KCTD15Q96SI1 283 aaPredicted RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 HERPUD2Q9BSE4 406 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 EIF2AQ9BY44 585 aaKnown RBP12.19□□□□□ -0.46
ERBB2-206ENST00000578373 SCUBE2Q9NQ36 999 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 TMPRSS4Q9NRS4 437 aa12.19□□□□□ -0.46
ERBB2-206ENST00000578373 CITO14578 2027 aa12.18□□□□□ -0.46
ERBB2-206ENST00000578373 PRR23AA6NEV1 266 aa12.18□□□□□ -0.46
ERBB2-206ENST00000578373 HGFP14210 728 aa12.18□□□□□ -0.46
ERBB2-206ENST00000578373 ADRA1BP35368 520 aa12.18□□□□□ -0.46
ERBB2-206ENST00000578373 BLMHQ13867 455 aa12.18□□□□□ -0.46
ERBB2-206ENST00000578373 KRT72Q14CN4 511 aa12.18□□□□□ -0.46
ERBB2-206ENST00000578373 PCID2Q5JVF3 399 aa12.18□□□□□ -0.46
ERBB2-206ENST00000578373 CDYL2Q8N8U2 506 aa12.18□□□□□ -0.46
ERBB2-206ENST00000578373 FAM120BQ96EK7 910 aaKnown RBP12.18□□□□□ -0.46
ERBB2-206ENST00000578373 HGH1Q9BTY7 390 aa12.18□□□□□ -0.46
ERBB2-206ENST00000578373 BBS2Q9BXC9 721 aa12.18□□□□□ -0.46
ERBB2-206ENST00000578373 LHX5Q9H2C1 402 aa12.18□□□□□ -0.46
ERBB2-206ENST00000578373 TBC1D13Q9NVG8 400 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms