RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 GRIA4P48058 902 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 MAPKAPK2P49137 400 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 PIGHQ14442 188 aaPredicted RBP13.07□□□□□ -0.32
CCDC57-211ENST00000578187 HLA-BQ31612 363 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 INAVAQ3KP66 663 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 H2AFVQ71UI9 128 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 PSTKQ8IV42 348 aaKnown RBP13.07□□□□□ -0.32
CCDC57-211ENST00000578187 DCAF4L2Q8NA75 395 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 KDF1Q8NAX2 398 aaPredicted RBP13.07□□□□□ -0.32
CCDC57-211ENST00000578187 ZNF564Q8TBZ8 553 aaPredicted RBP13.07□□□□□ -0.32
CCDC57-211ENST00000578187 EIF3CQ99613 913 aaKnown RBP13.07□□□□□ -0.32
CCDC57-211ENST00000578187 CDC6Q99741 560 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 EPAS1Q99814 870 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 OMDQ99983 421 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 SNRNP25Q9BV90 132 aaKnown RBP13.07□□□□□ -0.32
CCDC57-211ENST00000578187 MUC3BQ9H195 1237 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 PABPC3Q9H361 631 aaKnown RBP13.07□□□□□ -0.32
CCDC57-211ENST00000578187 FBXL12Q9NXK8 326 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 UVRAGQ9P2Y5 699 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 IP6K2Q9UHH9 426 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 VPS28Q9UK41 221 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 ZMIZ1Q9ULJ6 1067 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 TPX2Q9ULW0 747 aaKnown RBP13.07□□□□□ -0.32
CCDC57-211ENST00000578187 AP4E1Q9UPM8 1137 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 PCDHGB2Q9Y5G2 931 aa13.07□□□□□ -0.32
CCDC57-211ENST00000578187 KMT2BQ9UMN6 2715 aaPredicted RBP13.06□□□□□ -0.32
CCDC57-211ENST00000578187 A0A0D9SEW6 157 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 A0A1B0GVT2 93 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 FAM47DPA6NHR8 397 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 PRPSAP2O60256 369 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 DFNA5O60443 496 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 SIN3BO75182 1162 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 TOP3BO95985 862 aaKnown RBP13.06□□□□□ -0.32
CCDC57-211ENST00000578187 ADH1BP00325 375 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 FTH1P19P0C7X4 201 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 CDC25BP30305 580 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 CSNK1EP49674 416 aaKnown RBP13.06□□□□□ -0.32
CCDC57-211ENST00000578187 NUMBP49757 651 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 STK19P49842 368 aaPredicted RBP13.06□□□□□ -0.32
CCDC57-211ENST00000578187 C21orf59P57076 290 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 GNA12Q03113 381 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 CST6Q15828 149 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 CA9Q16790 459 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 ERMARDQ5T6L9 678 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 RWDD4Q6NW29 188 aaKnown RBP13.06□□□□□ -0.32
CCDC57-211ENST00000578187 RTL3Q8N8U3 475 aaKnown RBP13.06□□□□□ -0.32
CCDC57-211ENST00000578187 ZCCHC14Q8WYQ9 949 aaKnown RBP13.06□□□□□ -0.32
CCDC57-211ENST00000578187 GATA6Q92908 595 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 BIRC7Q96CA5 298 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 BTBD6Q96KE9 485 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 CAMK1GQ96NX5 476 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 PANX2Q96RD6 677 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 C2orf49Q9BVC5 232 aaPredicted RBP13.06□□□□□ -0.32
CCDC57-211ENST00000578187 ACE2Q9BYF1 805 aaPredicted RBP13.06□□□□□ -0.32
CCDC57-211ENST00000578187 TM9SF3Q9HD45 589 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 NDFIP2Q9NV92 336 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 GPATCH2LQ9NWQ4 482 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 PCSK1NQ9UHG2 260 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 VPS51Q9UID3 782 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 SLCO3A1Q9UIG8 710 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 SLC25A13Q9UJS0 675 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 KLK13Q9UKR3 277 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 PCOLCE2Q9UKZ9 415 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 FZD4Q9ULV1 537 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 HS3ST2Q9Y278 367 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 ACACBO00763 2458 aa13.06□□□□□ -0.32
CCDC57-211ENST00000578187 WASH4PA8MWX3 477 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 TTC34A8MYJ7 566 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 MYO1FO00160 1098 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 FGF10O15520 208 aaPredicted RBP13.05□□□□□ -0.32
CCDC57-211ENST00000578187 ATP9BO43861 1147 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 CREB3O43889 395 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 RNASEH2AO75792 299 aaKnown RBP13.05□□□□□ -0.32
CCDC57-211ENST00000578187 LCA5LO95447 670 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 TCF4P15884 667 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 IL1R2P27930 398 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 EPHB2P29323 1055 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 FAM193AP78312 1265 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 KRT83P78385 493 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 SLC25A11Q02978 314 aaKnown RBP13.05□□□□□ -0.32
CCDC57-211ENST00000578187 KIAA0895LQ68EN5 471 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 RAB44Q7Z6P3 723 aaPredicted RBP13.05□□□□□ -0.32
CCDC57-211ENST00000578187 DSG4Q86SJ6 1040 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 GLRX5Q86SX6 157 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 CHCHD4Q8N4Q1 142 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 OR7D4Q8NG98 312 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 RHBDD1Q8TEB9 315 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 FRS2Q8WU20 508 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 RPL10LQ96L21 214 aaKnown RBP13.05□□□□□ -0.32
CCDC57-211ENST00000578187 MTG2Q9H4K7 406 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 DHX35Q9H5Z1 703 aaKnown RBP13.05□□□□□ -0.32
CCDC57-211ENST00000578187 CTTNBP2NLQ9P2B4 639 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 LCMT1Q9UIC8 334 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 INTUQ9ULD6 942 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 ANKRD6Q9Y2G4 727 aa13.05□□□□□ -0.32
CCDC57-211ENST00000578187 CXorf51AA0A1B0GTR3 108 aa13.04□□□□□ -0.32
CCDC57-211ENST00000578187 A0A1W2PP55 124 aa13.04□□□□□ -0.32
CCDC57-211ENST00000578187 MID1O15344 667 aa13.04□□□□□ -0.32
CCDC57-211ENST00000578187 SNAP91O60641 907 aa13.04□□□□□ -0.32
CCDC57-211ENST00000578187 ZMPSTE24O75844 475 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms