RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 LINC01565O15544 149 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 AVILO75366 819 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 PHBP35232 272 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 ELK3P41970 407 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 MTM1Q13496 603 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 FSCBQ5H9T9 825 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 HP1BP3Q5SSJ5 553 aaPredicted RBP18.88■□□□□ 0.61
PRKCA-203ENST00000578063 SYCE2Q6PIF2 218 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 LINC00523Q86TU6 105 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 DCAF4L2Q8NA75 395 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 BHMTQ93088 406 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 FEM1AQ9BSK4 669 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 TMEM109Q9BVC6 243 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 POLR1EQ9GZS1 481 aaKnown RBP18.88■□□□□ 0.61
PRKCA-203ENST00000578063 LRRC4CQ9HCJ2 640 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 VPS45Q9NRW7 570 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 SEPT3Q9UH03 358 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 VPS28Q9UK41 221 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 CHMP2BQ9UQN3 213 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 OR51B4Q9Y5P0 310 aa18.88■□□□□ 0.61
PRKCA-203ENST00000578063 TMEM265A0A087WTH1 108 aa18.87■□□□□ 0.61
PRKCA-203ENST00000578063 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.87■□□□□ 0.61
PRKCA-203ENST00000578063 CBX4O00257 560 aa18.87■□□□□ 0.61
PRKCA-203ENST00000578063 SPAG6O75602 509 aa18.87■□□□□ 0.61
PRKCA-203ENST00000578063 SYF2O95926 243 aaKnown RBP18.87■□□□□ 0.61
PRKCA-203ENST00000578063 PENKP01210 267 aaPredicted RBP18.87■□□□□ 0.61
PRKCA-203ENST00000578063 SHBGP04278 402 aa18.87■□□□□ 0.61
PRKCA-203ENST00000578063 CSKP41240 450 aa18.87■□□□□ 0.61
PRKCA-203ENST00000578063 GRIA1P42261 906 aa18.87■□□□□ 0.61
PRKCA-203ENST00000578063 MPP3Q13368 585 aa18.87■□□□□ 0.61
PRKCA-203ENST00000578063 LRIT3Q3SXY7 679 aa18.87■□□□□ 0.61
PRKCA-203ENST00000578063 GET4Q7L5D6 327 aaPredicted RBP18.87■□□□□ 0.61
PRKCA-203ENST00000578063 PALM2Q8IXS6 379 aa18.87■□□□□ 0.61
PRKCA-203ENST00000578063 FIBINQ8TAL6 211 aa18.87■□□□□ 0.61
PRKCA-203ENST00000578063 WFDC5Q8TCV5 224 aa18.87■□□□□ 0.61
PRKCA-203ENST00000578063 FGF13Q92913 245 aa18.87■□□□□ 0.61
PRKCA-203ENST00000578063 IMP4Q96G21 291 aaKnown RBP18.87■□□□□ 0.61
PRKCA-203ENST00000578063 VPS37BQ9H9H4 285 aa18.87■□□□□ 0.61
PRKCA-203ENST00000578063 KIAA1522Q9P206 1035 aaPredicted RBP18.87■□□□□ 0.61
PRKCA-203ENST00000578063 NUP210Q8TEM1 1887 aaPredicted RBP18.86■□□□□ 0.61
PRKCA-203ENST00000578063 A0A1W2PPC1 479 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 CPP00450 1065 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 MYZAPP0CAP1 466 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 MZF1P28698 734 aaPredicted RBP18.86■□□□□ 0.61
PRKCA-203ENST00000578063 ITKQ08881 620 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 ADAM15Q13444 863 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 SLC12A1Q13621 1099 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 STAT4Q14765 748 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 SPATA22Q8NHS9 363 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 UHMK1Q8TAS1 419 aaKnown RBP18.86■□□□□ 0.61
PRKCA-203ENST00000578063 SMARCD2Q92925 531 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 IRF7Q92985 503 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 ASB16Q96NS5 453 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 CCDC77Q9BR77 488 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 C2orf49Q9BVC5 232 aaPredicted RBP18.86■□□□□ 0.61
PRKCA-203ENST00000578063 CINPQ9BW66 212 aaPredicted RBP18.86■□□□□ 0.61
PRKCA-203ENST00000578063 APOL5Q9BWW9 433 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 ROPN1BQ9BZX4 212 aaPredicted RBP18.86■□□□□ 0.61
PRKCA-203ENST00000578063 ROPN1Q9HAT0 212 aaPredicted RBP18.86■□□□□ 0.61
PRKCA-203ENST00000578063 CASS4Q9NQ75 786 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 SPHK2Q9NRA0 654 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 PLK2Q9NYY3 685 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 SDR42E2A6NKP2 422 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 GOLGA8KD6RF30 607 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 H3BQF6 201 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 IVLP07476 585 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 GLDCP23378 1020 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 ARF5P84085 180 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 SPARCL1Q14515 664 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 KRT71Q3SY84 523 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 ALG1LQ6GMV1 187 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 LEKR1Q6ZMV7 388 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 AGGF1Q8N302 714 aaeCLIP18.86■□□□□ 0.612e-9■□□□□ 8.6
PRKCA-203ENST00000578063 ZBTB9Q96C00 473 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 ALG14Q96F25 216 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 SIGLEC10Q96LC7 697 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 PSKH2Q96QS6 385 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 MGME1Q9BQP7 344 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 OBP2AQ9NY56 170 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 UBP1Q9NZI7 540 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 MARK1Q9P0L2 795 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 WNT6Q9Y6F9 365 aa18.86■□□□□ 0.61
PRKCA-203ENST00000578063 TCEA3O75764 348 aa18.85■□□□□ 0.61
PRKCA-203ENST00000578063 ZMPSTE24O75844 475 aa18.85■□□□□ 0.61
PRKCA-203ENST00000578063 MT-CYBP00156 380 aaPredicted RBP18.85■□□□□ 0.61
PRKCA-203ENST00000578063 GSTA2P09210 222 aa18.85■□□□□ 0.61
PRKCA-203ENST00000578063 GEMIN4P57678 1058 aaKnown RBP18.85■□□□□ 0.61
PRKCA-203ENST00000578063 GPX6P59796 221 aa18.85■□□□□ 0.61
PRKCA-203ENST00000578063 MAXP61244 160 aa18.85■□□□□ 0.61
PRKCA-203ENST00000578063 CDH17Q12864 832 aa18.85■□□□□ 0.61
PRKCA-203ENST00000578063 FAM78AQ5JUQ0 283 aa18.85■□□□□ 0.61
PRKCA-203ENST00000578063 C2orf16Q68DN1 1984 aa18.85■□□□□ 0.61
PRKCA-203ENST00000578063 CES5AQ6NT32 575 aa18.85■□□□□ 0.61
PRKCA-203ENST00000578063 TMEM25Q86YD3 366 aa18.85■□□□□ 0.61
PRKCA-203ENST00000578063 CCNJLQ8IV13 435 aa18.85■□□□□ 0.61
PRKCA-203ENST00000578063 IGDCC3Q8IVU1 814 aa18.85■□□□□ 0.61
PRKCA-203ENST00000578063 PGBD5Q8N414 524 aa18.85■□□□□ 0.61
PRKCA-203ENST00000578063 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.85■□□□□ 0.61
PRKCA-203ENST00000578063 DNAAF3Q8N9W5 541 aa18.85■□□□□ 0.61
PRKCA-203ENST00000578063 IPMKQ8NFU5 416 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms