RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 CPT1BQ92523 772 aa15.56■□□□□ 0.08
SS18-206ENST00000577572 ANKRD7Q92527 254 aa15.56■□□□□ 0.08
SS18-206ENST00000577572 CAVIN3Q969G5 261 aa15.56■□□□□ 0.08
SS18-206ENST00000577572 TTC17Q96AE7 1141 aa15.56■□□□□ 0.08
SS18-206ENST00000577572 FMO2Q99518 471 aa15.56■□□□□ 0.08
SS18-206ENST00000577572 SLC25A51Q9H1U9 297 aa15.56■□□□□ 0.08
SS18-206ENST00000577572 GLOD4Q9HC38 313 aa15.56■□□□□ 0.08
SS18-206ENST00000577572 ABCB8Q9NUT2 735 aa15.56■□□□□ 0.08
SS18-206ENST00000577572 SEPT10Q9P0V9 454 aa15.56■□□□□ 0.08
SS18-206ENST00000577572 RSPH14Q9UHP6 348 aa15.56■□□□□ 0.08
SS18-206ENST00000577572 GGA2Q9UJY4 613 aa15.56■□□□□ 0.08
SS18-206ENST00000577572 NFU1Q9UMS0 254 aa15.56■□□□□ 0.08
SS18-206ENST00000577572 DENND4AQ7Z401 1863 aa15.56■□□□□ 0.08
SS18-206ENST00000577572 CHD5Q8TDI0 1954 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 E7EVH7 732 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 H3BQ06 376 aaPredicted RBP15.55■□□□□ 0.08
SS18-206ENST00000577572 TP73O15350 636 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 EIF3HO15372 352 aaKnown RBP eCLIP15.55■□□□□ 0.08
SS18-206ENST00000577572 ZBTB24O43167 697 aaPredicted RBP15.55■□□□□ 0.08
SS18-206ENST00000577572 SUN1O94901 812 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 ASLP04424 464 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 PABPC1P11940 636 aaKnown RBP15.55■□□□□ 0.08
SS18-206ENST00000577572 MLNP12872 115 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 MZF1P28698 734 aaPredicted RBP15.55■□□□□ 0.08
SS18-206ENST00000577572 HLA-FP30511 346 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 VPS41P49754 854 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 RUNX3Q13761 415 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 ZNF235Q14590 738 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 KCNJ11Q14654 390 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 EIF4HQ15056 248 aaKnown RBP15.55■□□□□ 0.08
SS18-206ENST00000577572 SMAD2Q15796 467 aaKnown RBP15.55■□□□□ 0.08
SS18-206ENST00000577572 PITRM1Q5JRX3 1037 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 PARM1Q6UWI2 310 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 SUGP1Q8IWZ8 645 aaKnown RBP15.55■□□□□ 0.08
SS18-206ENST00000577572 KDM1BQ8NB78 822 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 FBXO25Q8TCJ0 367 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 AENQ8WTP8 325 aaKnown RBP15.55■□□□□ 0.08
SS18-206ENST00000577572 ISG20Q96AZ6 181 aaKnown RBP15.55■□□□□ 0.08
SS18-206ENST00000577572 AGAP3Q96P47 875 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 POLR1EQ9GZS1 481 aaKnown RBP15.55■□□□□ 0.08
SS18-206ENST00000577572 ETNK1Q9HBU6 452 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 XAB2Q9HCS7 855 aaKnown RBP15.55■□□□□ 0.08
SS18-206ENST00000577572 ARFGAP3Q9NP61 516 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 VPS51Q9UID3 782 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 HS3ST2Q9Y278 367 aa15.55■□□□□ 0.08
SS18-206ENST00000577572 CBX4O00257 560 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 METTL18O95568 372 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 MAPK8P45983 427 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 CSNK1DP48730 415 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 DGKGP49619 791 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 GEMP55040 296 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 BASP1P80723 227 aaKnown RBP15.54■□□□□ 0.08
SS18-206ENST00000577572 ARF5P84085 180 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 SLC10A7Q0GE19 358 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 SKIV2LQ15477 1246 aaKnown RBP15.54■□□□□ 0.08
SS18-206ENST00000577572 ITPRIPL2Q3MIP1 535 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 NUDT18Q6ZVK8 323 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 B4GALNT4Q76KP1 1039 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 LINC00523Q86TU6 105 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 PLPP6Q8IY26 295 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 NETO2Q8NC67 525 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 PRCCQ92733 491 aaPredicted RBP15.54■□□□□ 0.08
SS18-206ENST00000577572 FGF14Q92915 247 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 ASIC4Q96FT7 647 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 IMP4Q96G21 291 aaKnown RBP15.54■□□□□ 0.08
SS18-206ENST00000577572 MGME1Q9BQP7 344 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 CINPQ9BW66 212 aaPredicted RBP15.54■□□□□ 0.08
SS18-206ENST00000577572 CEP44Q9C0F1 390 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 EBF3Q9H4W6 596 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 HPS4Q9NQG7 708 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 PLK2Q9NYY3 685 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 DEC1Q9P2X7 70 aa15.54■□□□□ 0.08
SS18-206ENST00000577572 ARNTLO00327 626 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 AP2A1O95782 977 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 EPOP01588 193 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 ATP5BP06576 529 aaKnown RBP15.53■□□□□ 0.08
SS18-206ENST00000577572 APRTP07741 180 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 CISD3P0C7P0 127 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 ARSAP15289 507 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 CD70P32970 193 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 CD68P34810 354 aaPredicted RBP15.53■□□□□ 0.08
SS18-206ENST00000577572 SERPINH1P50454 418 aaKnown RBP15.53■□□□□ 0.08
SS18-206ENST00000577572 MPP3Q13368 585 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 TRADDQ15628 312 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 PRUNE1Q86TP1 453 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 PDIK1LQ8N165 341 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 MREGQ8N565 214 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 WFDC5Q8TCV5 224 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 BHMTQ93088 406 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 TADA1Q96BN2 335 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 LRRC39Q96DD0 335 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 MSANTD3Q96H12 275 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 PKNOX2Q96KN3 472 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 LRRC40Q9H9A6 602 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 DNAJC17Q9NVM6 304 aaKnown RBP15.53■□□□□ 0.08
SS18-206ENST00000577572 CLEC4EQ9ULY5 219 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 NUMBLQ9Y6R0 609 aa15.53■□□□□ 0.08
SS18-206ENST00000577572 KIF26AQ9ULI4 1882 aaPredicted RBP15.52■□□□□ 0.08
SS18-206ENST00000577572 DOCK8Q8NF50 2099 aa15.52■□□□□ 0.08
SS18-206ENST00000577572 TULP3O75386 442 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms