RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 HPS6Q86YV9 775 aa9.09□□□□□ -0.95
NCBP3-204ENST00000574911 ARHGAP12Q8IWW6 846 aa9.09□□□□□ -0.95
NCBP3-204ENST00000574911 SLC26A7Q8TE54 656 aa9.09□□□□□ -0.95
NCBP3-204ENST00000574911 DQX1Q8TE96 717 aaKnown RBP9.09□□□□□ -0.95
NCBP3-204ENST00000574911 USP33Q8TEY7 942 aa9.09□□□□□ -0.95
NCBP3-204ENST00000574911 STYXQ8WUJ0 223 aa9.09□□□□□ -0.95
NCBP3-204ENST00000574911 LENG8Q96PV6 779 aaPredicted RBP9.09□□□□□ -0.95
NCBP3-204ENST00000574911 FCRL5Q96RD9 977 aa9.09□□□□□ -0.95
NCBP3-204ENST00000574911 TBL1YQ9BQ87 522 aa9.09□□□□□ -0.95
NCBP3-204ENST00000574911 AP5M1Q9H0R1 490 aa9.09□□□□□ -0.95
NCBP3-204ENST00000574911 ZNF385DQ9H6B1 395 aa9.09□□□□□ -0.95
NCBP3-204ENST00000574911 ARHGEF38Q9NXL2 777 aa9.09□□□□□ -0.95
NCBP3-204ENST00000574911 RUVBL2Q9Y230 463 aaKnown RBP9.09□□□□□ -0.95
NCBP3-204ENST00000574911 AAR2Q9Y312 384 aaKnown RBP9.09□□□□□ -0.95
NCBP3-204ENST00000574911 MYO18AQ92614 2054 aaKnown RBP9.08□□□□□ -0.96
NCBP3-204ENST00000574911 CCDC189A1A4V9 331 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 TK2O00142 265 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 SLC22A2O15244 555 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 HDAC3O15379 428 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 DDHD2O94830 711 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 LYNP07948 512 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 SLC35E2BP0CK96 405 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 SRGAP2BP0DMP2 458 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 CD1EP15812 388 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 PCSK1P29120 753 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 RPL9P32969 192 aaKnown RBP9.08□□□□□ -0.96
NCBP3-204ENST00000574911 ARCN1P48444 511 aaKnown RBP9.08□□□□□ -0.96
NCBP3-204ENST00000574911 RPL14P50914 215 aaKnown RBP9.08□□□□□ -0.96
NCBP3-204ENST00000574911 PURAQ00577 322 aaKnown RBP9.08□□□□□ -0.96
NCBP3-204ENST00000574911 ASPHQ12797 758 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 SLC12A1Q13621 1099 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 TIGD5Q53EQ6 642 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 ARTNQ5T4W7 220 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 SPRYD7Q5W111 196 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 DENND5AQ6IQ26 1287 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 TAF2Q6P1X5 1199 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 BEND5Q7L4P6 421 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 SLC41A1Q8IVJ1 513 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 CCDC117Q8IWD4 279 aaPredicted RBP9.08□□□□□ -0.96
NCBP3-204ENST00000574911 CENPLQ8N0S6 344 aaPredicted RBP9.08□□□□□ -0.96
NCBP3-204ENST00000574911 PHC3Q8NDX5 983 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 SPATA22Q8NHS9 363 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 LPPQ93052 612 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 MOCOSQ96EN8 888 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 IL12RB2Q99665 862 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 SLC24A3Q9HC58 644 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 ST3GAL5Q9UNP4 418 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 SSX2IPQ9Y2D8 614 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 TRPV2Q9Y5S1 764 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 FNDC1Q4ZHG4 1894 aaPredicted RBP9.08□□□□□ -0.96
NCBP3-204ENST00000574911 ARL5CA6NH57 179 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 H3BNX3 289 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 DFFAO00273 331 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 PHGDHO43175 533 aaKnown RBP9.08□□□□□ -0.96
NCBP3-204ENST00000574911 PIGNO95427 931 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 UBTFL6P0CB48 400 aaPredicted RBP9.08□□□□□ -0.96
NCBP3-204ENST00000574911 THRAP10827 490 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 HOXC13P31276 330 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 CCR10P46092 362 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 PGGT1BP53609 377 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 XIAPP98170 497 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 NSUN2Q08J23 767 aaKnown RBP eCLIP9.08□□□□□ -0.96
NCBP3-204ENST00000574911 PRKAA1Q13131 559 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 CCL14Q16627 93 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 UPP1Q16831 310 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 LSM12Q3MHD2 195 aaKnown RBP9.08□□□□□ -0.96
NCBP3-204ENST00000574911 SFT2D3Q587I9 215 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 ARL13AQ5H913 290 aaPredicted RBP9.08□□□□□ -0.96
NCBP3-204ENST00000574911 RNF220Q5VTB9 566 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 SEL1L3Q68CR1 1132 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 KBTBD6Q86V97 674 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 LSMEM2Q8N112 164 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 EFCAB3Q8N7B9 438 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 AGR3Q8TD06 166 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 KCTD4Q8WVF5 259 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 TSNARE1Q96NA8 513 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 GPR78Q96P69 363 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 TRAPPC9Q96Q05 1148 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 PKMYT1Q99640 499 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 PAAF1Q9BRP4 392 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 EBF3Q9H4W6 596 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 WDR55Q9H6Y2 383 aaPredicted RBP9.08□□□□□ -0.96
NCBP3-204ENST00000574911 MRM3Q9HC36 420 aaKnown RBP9.08□□□□□ -0.96
NCBP3-204ENST00000574911 GLOD4Q9HC38 313 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 CHST12Q9NRB3 414 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 PDP2Q9P2J9 529 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 VTI1BQ9UEU0 232 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 CPA4Q9UI42 421 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 ZDHHC2Q9UIJ5 367 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 GIT1Q9Y2X7 761 aa9.08□□□□□ -0.96
NCBP3-204ENST00000574911 GOLGA8QA0A0J9YX86 632 aa9.07□□□□□ -0.96
NCBP3-204ENST00000574911 CCDC78A2IDD5 438 aa9.07□□□□□ -0.96
NCBP3-204ENST00000574911 RGSL1A5PLK6 1076 aa9.07□□□□□ -0.96
NCBP3-204ENST00000574911 GOLGA8OA6NCC3 632 aa9.07□□□□□ -0.96
NCBP3-204ENST00000574911 CASTOR2A6NHX0 329 aa9.07□□□□□ -0.96
NCBP3-204ENST00000574911 GOLGA8NF8WBI6 632 aa9.07□□□□□ -0.96
NCBP3-204ENST00000574911 CASQ2O14958 399 aaPredicted RBP9.07□□□□□ -0.96
NCBP3-204ENST00000574911 FESP07332 822 aa9.07□□□□□ -0.96
NCBP3-204ENST00000574911 TFEBP19484 476 aa9.07□□□□□ -0.96
NCBP3-204ENST00000574911 SAT1P21673 171 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms