RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 C5orf22Q49AR2 442 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 CCDC157Q569K6 752 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 TRNP1Q6NT89 227 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 RWDD4Q6NW29 188 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 C22orf39Q6P5X5 142 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 LINGO4Q6UY18 593 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 PRPF39Q86UA1 669 aaKnown RBP9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 TMEM139Q8IV31 216 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 PNPLA1Q8N8W4 532 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 DCAF4L2Q8NA75 395 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 OR7D4Q8NG98 312 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 GRIN3AQ8TCU5 1115 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 RXFP2Q8WXD0 754 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 ALG14Q96F25 216 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 SERAC1Q96JX3 654 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 HAPLN3Q96S86 360 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 SPON2Q9BUD6 331 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 SELENOOQ9BVL4 669 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 ZYG11BQ9C0D3 744 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 ATP13A1Q9HD20 1204 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 ADAM22Q9P0K1 906 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 TMEM59LQ9UK28 342 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 PCOLCE2Q9UKZ9 415 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 SARDHQ9UL12 918 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 SIK3Q9Y2K2 1263 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 PCDHGB2Q9Y5G2 931 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 WDFY3Q8IZQ1 3526 aa9.89□□□□□ -0.83
NPLOC4-216ENST00000574344 ASPMQ8IZT6 3477 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 IGF2RP11717 2491 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 A0A0D9SEW6 157 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 ANKRD62A6NC57 917 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 H0Y8X5 98 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 RIOK3O14730 519 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 MCF2LO15068 1137 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 VILLO15195 856 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 SLC7A4O43246 635 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 PLRG1O43660 514 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 ENDOD1O94919 500 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 GJB6O95452 261 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 MT-CO1P00395 513 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 CYP1A1P04798 512 aaPredicted RBP9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 CALB1P05937 261 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 CHRNB2P17787 502 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 FECHP22830 423 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 MMP8P22894 467 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 CTSKP43235 329 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 GRK6P43250 576 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 VASPP50552 380 aaPredicted RBP9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 DNA2P51530 1060 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 CCR5P51681 352 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 ETF1P62495 437 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 ZBED6P86452 979 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 CNTN1Q12860 1018 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 KCNT1Q5JUK3 1230 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 ZNF354CQ86Y25 554 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 ZNF683Q8IZ20 524 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 OR8K1Q8NGG5 319 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 JOSD2Q8TAC2 188 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 FAM172AQ8WUF8 416 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 ZCCHC14Q8WYQ9 949 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 PPP1R16AQ96I34 528 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 C1orf74Q96LT6 269 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 ERGIC2Q96RQ1 377 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 PSMB7Q99436 277 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 CDC6Q99741 560 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 ORAI3Q9BRQ5 295 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 TNKS2Q9H2K2 1166 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 EBF2Q9HAK2 575 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 GDF3Q9NR23 364 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 TPX2Q9ULW0 747 aaKnown RBP9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 CAPN11Q9UMQ6 739 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 WASF3Q9UPY6 502 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 HS3ST2Q9Y278 367 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 BTBD3Q9Y2F9 522 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 OR51B4Q9Y5P0 310 aa9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 COL5A1P20908 1838 aaPredicted RBP9.88□□□□□ -0.83
NPLOC4-216ENST00000574344 SPEGQ15772 3267 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 IGLV3-10A0A075B6K4 115 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 ILVBLA1L0T0 632 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 TMEM8BA6NDV4 472 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 SOWAHDA6NJG2 315 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 DRGXA6NNA5 263 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 K7ERQ8 282 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 DFNA5O60443 496 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 CBFA2T3O75081 653 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 PRNPP04156 253 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 ITGAVP06756 1048 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 CCDC172P0C7W6 258 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 KRT3P12035 628 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 DESP17661 470 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 GPD1P21695 349 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 GLDCP23378 1020 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 CASQ1P31415 396 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 CHRNA3P32297 505 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 CLCN6P51797 869 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 CCDC15Q0P6D6 951 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 CLEC16AQ2KHT3 1053 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 CCDC14Q49A88 953 aa9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 SETMARQ53H47 684 aaPredicted RBP9.87□□□□□ -0.83
NPLOC4-216ENST00000574344 RAB6CQ53S08 254 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms