RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 NSUN3Q9H649 340 aaKnown RBP10.28□□□□□ -0.76
SMG6-213ENST00000573166 SMIM24O75264 130 aa10.27□□□□□ -0.76
SMG6-213ENST00000573166 CXCR3P49682 368 aa10.27□□□□□ -0.76
SMG6-213ENST00000573166 WNT3AP56704 352 aa10.27□□□□□ -0.76
SMG6-213ENST00000573166 PITX1P78337 314 aaPredicted RBP10.27□□□□□ -0.76
SMG6-213ENST00000573166 CDK18Q07002 472 aa10.27□□□□□ -0.76
SMG6-213ENST00000573166 MPP3Q13368 585 aa10.27□□□□□ -0.76
SMG6-213ENST00000573166 FAM171BQ6P995 826 aa10.27□□□□□ -0.76
SMG6-213ENST00000573166 CACNA2D3Q8IZS8 1091 aa10.27□□□□□ -0.76
SMG6-213ENST00000573166 CMTM8Q8IZV2 173 aa10.27□□□□□ -0.76
SMG6-213ENST00000573166 SLC43A3Q8NBI5 491 aa10.27□□□□□ -0.76
SMG6-213ENST00000573166 OR8D1Q8WZ84 308 aa10.27□□□□□ -0.76
SMG6-213ENST00000573166 CLSTN3Q9BQT9 956 aa10.27□□□□□ -0.76
SMG6-213ENST00000573166 FAM167BQ9BTA0 163 aa10.27□□□□□ -0.76
SMG6-213ENST00000573166 GLOD4Q9HC38 313 aa10.27□□□□□ -0.76
SMG6-213ENST00000573166 HECAQ9UBI9 543 aaPredicted RBP10.27□□□□□ -0.76
SMG6-213ENST00000573166 CITO14578 2027 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 LINC01553A4QN01 128 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 ZNF840PA6NDX5 716 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 ADAM12O43184 909 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 FAM189A1O60320 539 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 CXCL10P02778 98 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 SSTR1P30872 391 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 ABL2P42684 1182 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 NTHL1P78549 312 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 CRADDP78560 199 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 MGAT5Q09328 741 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 LRRC14Q15048 493 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 TTLL9Q3SXZ7 439 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 HSP90AA5PQ58FG0 334 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 FAM46CQ5VWP2 391 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 STRA8Q7Z7C7 330 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 TMEM173Q86WV6 379 aaPredicted RBP10.27□□□□□ -0.77
SMG6-213ENST00000573166 PSMG2Q969U7 264 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 ZIM3Q96PE6 472 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 CRISPLD2Q9H0B8 497 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 OSBPL2Q9H1P3 480 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 CPSF2Q9P2I0 782 aaKnown RBP10.27□□□□□ -0.77
SMG6-213ENST00000573166 TRMT6Q9UJA5 497 aaKnown RBP10.27□□□□□ -0.77
SMG6-213ENST00000573166 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.27□□□□□ -0.77
SMG6-213ENST00000573166 GOLGA8TH3BQL2 631 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 EIF3HO15372 352 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMG6-213ENST00000573166 TRIM16O95361 564 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 UGT2B4P06133 528 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 FAM47EQ6ZV65 393 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 RAB42Q8N4Z0 105 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 OVCA2Q8WZ82 227 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 ARL8AQ96BM9 186 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 SPATA17Q96L03 361 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 ROPN1BQ9BZX4 212 aaPredicted RBP10.27□□□□□ -0.77
SMG6-213ENST00000573166 ROPN1Q9HAT0 212 aaPredicted RBP10.27□□□□□ -0.77
SMG6-213ENST00000573166 GTSE1Q9NYZ3 720 aa10.27□□□□□ -0.77
SMG6-213ENST00000573166 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.27□□□□□ -0.77
SMG6-213ENST00000573166 EVLQ9UI08 416 aaPredicted RBP10.27□□□□□ -0.77
SMG6-213ENST00000573166 G3BP2Q9UN86 482 aaKnown RBP10.27□□□□□ -0.77
SMG6-213ENST00000573166 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.26□□□□□ -0.77
SMG6-213ENST00000573166 XKR4Q5GH76 650 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 SLC8B1Q6J4K2 584 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 CNPY4Q8N129 248 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 N4BP2L2Q92802 583 aaPredicted RBP10.26□□□□□ -0.77
SMG6-213ENST00000573166 RSRC1Q96IZ7 334 aaKnown RBP10.26□□□□□ -0.77
SMG6-213ENST00000573166 DTLQ9NZJ0 730 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.26□□□□□ -0.77
SMG6-213ENST00000573166 CHKBQ9Y259 395 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 HS3ST4Q9Y661 456 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 C2orf78A6NCI8 922 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 LEFTY2O00292 366 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 CHADO15335 359 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 VPS26AO75436 327 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 GMNNO75496 209 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 AGTP01019 485 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 CTPS1P17812 591 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 NDST2P52849 883 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 USP46P62068 366 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 PPP2R2AP63151 447 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 RASGEF1CQ8N431 466 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 CDC26Q8NHZ8 85 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 LINC01599Q8WXQ3 324 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 SLC39A8Q9C0K1 460 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 IL22Q9GZX6 179 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 TNKS2Q9H2K2 1166 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 OSGEPL1Q9H4B0 414 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 SYNDIG1Q9H7V2 258 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 TMEM59LQ9UK28 342 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 MRPS17Q9Y2R5 130 aaKnown RBP10.26□□□□□ -0.77
SMG6-213ENST00000573166 C1orf232A0A0U1RR37 186 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 MAP2K7O14733 419 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 FOSL2P15408 326 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 CES1P23141 567 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 CCNCP24863 283 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 SEC24CP53992 1094 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 ZNF470Q6ECI4 717 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 RD3Q7Z3Z2 195 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 CRLF3Q8IUI8 442 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 RGL4Q8IZJ4 473 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 GSTCDQ8NEC7 633 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 HERVK_113Q902F9 699 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 NKD2Q969F2 451 aaPredicted RBP10.26□□□□□ -0.77
SMG6-213ENST00000573166 SPATA16Q9BXB7 569 aa10.26□□□□□ -0.77
SMG6-213ENST00000573166 H3BQ06 376 aaPredicted RBP10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms