RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 SPON2Q9BUD6 331 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 SELENOOQ9BVL4 669 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 KDM4CQ9H3R0 1056 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 ATP13A1Q9HD20 1204 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 DYRK4Q9NR20 520 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 PPARGC1AQ9UBK2 798 aaKnown RBP12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 KLK13Q9UKR3 277 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 ASPMQ8IZT6 3477 aa12.65□□□□□ -0.38
CTDNEP1-205ENST00000570828 ADAMTS9Q9P2N4 1935 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 ANKRD62A6NC57 917 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 LRRC10BA6NIK2 292 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 C2CD4BA6NLJ0 364 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 H0Y8X5 98 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 K7ERQ8 282 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 KPNA3O00505 521 aaPredicted RBP12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 LATO43561 262 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 PCDHGA12O60330 932 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 GJB6O95452 261 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 PRNPP04156 253 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 CCDC172P0C7W6 258 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 CD38P28907 300 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 ADRA1BP35368 520 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 NUDT1P36639 197 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 ETFBP38117 255 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 GSCP56915 257 aaPredicted RBP12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 COPS2P61201 443 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 GNA12Q03113 381 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 CCDC15Q0P6D6 951 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 ANO6Q4KMQ2 910 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 KCNT1Q5JUK3 1230 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 NAPEPLDQ6IQ20 393 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 DNAJC24Q6P3W2 148 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 APTXQ7Z2E3 356 aaKnown RBP12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 GLRX5Q86SX6 157 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 PRPF39Q86UA1 669 aaKnown RBP12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 PHF13Q86YI8 300 aaPredicted RBP12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 CHCHD4Q8N4Q1 142 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 C3orf20Q8ND61 904 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 OR2A12Q8NGT7 310 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 GRIN3AQ8TCU5 1115 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 FAM172AQ8WUF8 416 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 HSD3B7Q9H2F3 369 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 EBF2Q9HAK2 575 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 GDF3Q9NR23 364 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 ZNF212Q9UDV6 495 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 OR12D3Q9UGF7 316 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 MSRB2Q9Y3D2 182 aa12.64□□□□□ -0.39
CTDNEP1-205ENST00000570828 TMEM8BA6NDV4 472 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 C10orf142B7Z368 130 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 KCNK3O14649 394 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 SMAD6O43541 496 aaKnown RBP12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 ATP1A3P13637 1013 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 FERP16591 822 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 GPD1P21695 349 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 GLDCP23378 1020 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 MAT2AP31153 395 aaKnown RBP12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 CHRNA3P32297 505 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 MAPKAPK2P49137 400 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 SERPINH1P50454 418 aaKnown RBP12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 IL9RQ01113 521 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 NRG1Q02297 640 aaPredicted RBP12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 PTP4A2Q12974 167 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 SETMARQ53H47 684 aaPredicted RBP12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 RAB6CQ53S08 254 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 MANEALQ5VSG8 457 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 DBX2Q6ZNG2 339 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 MON1BQ7L1V2 547 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 RAB44Q7Z6P3 723 aaPredicted RBP12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 TRIM69Q86WT6 500 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 PNPLA1Q8N8W4 532 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 BAHD1Q8TBE0 780 aaPredicted RBP12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 GATA6Q92908 595 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 TBC1D31Q96DN5 1066 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 PPP1R16AQ96I34 528 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 ELF4Q99607 663 aaPredicted RBP12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 AGPAT1Q99943 283 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 CEP44Q9C0F1 390 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 RAB6CQ9H0N0 254 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 OSBPL2Q9H1P3 480 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 TNKS2Q9H2K2 1166 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 PREBQ9HCU5 417 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 TMEM63CQ9P1W3 806 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 DMTF1Q9Y222 760 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 BTBD3Q9Y2F9 522 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 SPEGQ15772 3267 aa12.63□□□□□ -0.39
CTDNEP1-205ENST00000570828 A0A1B0GTQ1 180 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 A0A1W2PR77 199 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 TLR4O00206 839 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 YKT6O15498 198 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 MAGEC1O60732 1142 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 KRT37O76014 449 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 LRIG2O94898 1065 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 WNT1P04628 370 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 CTSLP07711 333 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 RHOQP17081 205 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 DESP17661 470 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 RFC1P35251 1148 aaPredicted RBP12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 ARRB1P49407 418 aaPredicted RBP12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 DNA2P51530 1060 aa12.62□□□□□ -0.39
CTDNEP1-205ENST00000570828 HDAC4P56524 1084 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms