RNA–Protein interactions for RNA: ENST00000570484.1

CTDNEP1-204, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-204ENST00000570484 LRRC19Q9H756 370 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 C8orf33Q9H7E9 229 aaPredicted RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 HPS4Q9NQG7 708 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 RRAGDQ9NQL2 400 aaPredicted RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 PRDM6Q9NQX0 595 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 NDFIP2Q9NV92 336 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 GOLGA6AQ9NYA3 693 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 FBXL21Q9UKT6 434 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 DNPEPQ9ULA0 475 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 UTP11Q9Y3A2 253 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 PIAS3Q9Y6X2 628 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 LAMA2P24043 3122 aaKnown RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 OBSL1O75147 1896 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 NUP210Q8TEM1 1887 aaPredicted RBP6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 GREB1Q4ZG55 1949 aa6.72□□□□□ -1.33
CTDNEP1-204ENST00000570484 A0A0A0MRY4 1105 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 A0A0D9SEW6 157 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 BCLAF3A2AJT9 711 aaKnown RBP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 TBC1D3BA6NDS4 549 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 LOC730098B7Z3J9 87 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 E7EVH7 732 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 SPECC1L-ADORA2AF8WAN1 911 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 KCNK1O00180 336 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 MATN3O15232 486 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 LZTS3O60299 673 aaPredicted RBP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 PRAMEF11O60813 436 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 OPHN1O60890 802 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 ATP5BP06576 529 aaKnown RBP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 CCNB1P14635 433 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 CCNCP24863 283 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 MZF1P28698 734 aaPredicted RBP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 RBL1P28749 1068 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 HLA-FP30511 346 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 STIP1P31948 543 aaKnown RBP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 CD70P32970 193 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 GJA4P35212 333 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 ACVRL1P37023 503 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 HSPA9P38646 679 aaKnown RBP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 MMP13P45452 471 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 RECQLP46063 649 aaPredicted RBP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 LMAN1P49257 510 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 VPS41P49754 854 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 SERPINH1P50454 418 aaKnown RBP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 RENBPP51606 427 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 RHOAP61586 193 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 IL10RBQ08334 325 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 ITKQ08881 620 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 GRSF1Q12849 480 aaKnown RBP eCLIP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 CALCOCO2Q13137 446 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 PRPSAP1Q14558 356 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 RFTN1Q14699 578 aaPredicted RBP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 LBRQ14739 615 aaKnown RBP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 SIX1Q15475 284 aaPredicted RBP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 MAP7D1Q3KQU3 841 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 FUT11Q495W5 492 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 FNDC3BQ53EP0 1204 aaKnown RBP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 FSCBQ5H9T9 825 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 MARC1Q5VT66 337 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 AFMIDQ63HM1 303 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 MBLAC2Q68D91 279 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 RNF43Q68DV7 783 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 VASH1Q7L8A9 365 aaPredicted RBP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 C12orf40Q86WS4 652 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 JAMLQ86YT9 394 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 SLC44A3Q8N4M1 653 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 ALLCQ8N6M5 410 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 TERB1Q8NA31 727 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 ATP11CQ8NB49 1132 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 ATL2Q8NHH9 583 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 USP33Q8TEY7 942 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 CASKIN2Q8WXE0 1202 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 P2RY11Q96G91 374 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 SPATA13Q96N96 652 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 PPP1R2P1Q96PQ5 205 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 P2RY13Q9BPV8 354 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 FEM1AQ9BSK4 669 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 RPP25Q9BUL9 199 aaKnown RBP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 KLC2Q9H0B6 622 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 PCDH9Q9HC56 1237 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 TRPV5Q9NQA5 729 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 PAK5Q9P286 719 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 ZNF212Q9UDV6 495 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 SEPT3Q9UH03 358 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 AMACRQ9UHK6 382 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 RSPH14Q9UHP6 348 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 VPS51Q9UID3 782 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 DUSP12Q9UNI6 340 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 SORCS3Q9UPU3 1222 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 SLC27A6Q9Y2P4 619 aa6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 HELZP42694 1942 aaKnown RBP6.71□□□□□ -1.34
CTDNEP1-204ENST00000570484 MTCL1Q9Y4B5 1905 aaKnown RBP6.7□□□□□ -1.34
CTDNEP1-204ENST00000570484 C2orf16Q68DN1 1984 aa6.7□□□□□ -1.34
CTDNEP1-204ENST00000570484 FAM187AA6NFU0 413 aa6.7□□□□□ -1.34
CTDNEP1-204ENST00000570484 EFCAB8A8MWE9 144 aa6.7□□□□□ -1.34
CTDNEP1-204ENST00000570484 J3KR12 359 aa6.7□□□□□ -1.34
CTDNEP1-204ENST00000570484 ARNTLO00327 626 aa6.7□□□□□ -1.34
CTDNEP1-204ENST00000570484 TTI1O43156 1089 aa6.7□□□□□ -1.34
CTDNEP1-204ENST00000570484 RAD51CO43502 376 aa6.7□□□□□ -1.34
CTDNEP1-204ENST00000570484 KDELR3O43731 214 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms