RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 IL23AQ9NPF7 189 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 CCDC177Q9NQR7 707 aaPredicted RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 ZDHHC7Q9NXF8 308 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 ETAA1Q9NY74 926 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 THEGQ9P2T0 379 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 CTNND2Q9UQB3 1225 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 GDAQ9Y2T3 454 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 SLC4A4Q9Y6R1 1079 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 PIEZO1Q92508 2521 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 CHD9Q3L8U1 2897 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 PLIN4Q96Q06 1357 aa3.4□□□□□ -1.86
CNOT1-221ENST00000569924 MCM3APO60318 1980 aa3.4□□□□□ -1.86
CNOT1-221ENST00000569924 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 TRIM64A6NGJ6 449 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 NPIPB15A6NHN6 443 aaPredicted RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 TRIM64BA6NI03 449 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 ASB14A6NK59 587 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 SLC38A8A6NNN8 435 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 TBKBP1A7MCY6 615 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 GRXCR1A8MXD5 290 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 F5H6K3 240 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 SMIM22K7EJ46 135 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 UBE2CO00762 179 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 SH2B2O14492 632 aaPredicted RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 HOXA3O43365 443 aaPredicted RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 HNRNPRO43390 633 aaKnown RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 DHX16O60231 1041 aaKnown RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 SRGAP2O75044 1071 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 TTLL1O95922 423 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 NDUFB10O96000 172 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 FGBP02675 491 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 TUBB4AP04350 444 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 SCG2P13521 617 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 TNNT1P13805 278 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 ITGB5P18084 799 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 GNAT2P19087 354 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 LORP23490 312 aaPredicted RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 NFKBIAP25963 317 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 VIPR1P32241 457 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 CYP2C18P33260 490 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 ABCD1P33897 745 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 BSGP35613 385 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 PXNP49023 591 aaPredicted RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 NPEPPSP55786 919 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 LOXL3P58215 753 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 LILRA4P59901 499 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 KLRC3Q07444 240 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 KCNMA1Q12791 1236 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 MYO1EQ12965 1108 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 PRPF4BQ13523 1007 aaKnown RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 ACAP1Q15027 740 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 TMEM266Q2M3C6 531 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 PTCHD3Q3KNS1 767 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 ZNF362Q5T0B9 420 aaPredicted RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 DEPDC1Q5TB30 811 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 AGBL4Q5VU57 503 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 LRCH2Q5VUJ6 765 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 ANKS6Q68DC2 871 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 MSANTD2Q6P1R3 559 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 LAYNQ6UX15 382 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 TREML4Q6UXN2 200 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 MFSD6Q6ZSS7 791 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 ARMCX2Q7L311 632 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 VSIG10LQ86VR7 867 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 REXO1L1PQ8IX06 675 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 TMEFF1Q8IYR6 380 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 SPARTQ8N0X7 666 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 NDUFAF2Q8N183 169 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 CFAP52Q8N1V2 620 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 ANKRD35Q8N283 1001 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 PTGR2Q8N8N7 351 aaPredicted RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 FAM133AQ8N9E0 248 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 AVL9Q8NBF6 648 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 KCTD6Q8NC69 237 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 MSANTD4Q8NCY6 345 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 DNAJB14Q8TBM8 379 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 RSPH1Q8WYR4 309 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 MCRS1Q96EZ8 462 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 BORCS6Q96GS4 357 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 RPL10LQ96L21 214 aaKnown RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 LENG8Q96PV6 779 aaPredicted RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 NR1H4Q96RI1 486 aaPredicted RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 SMOQ99835 787 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 PAAF1Q9BRP4 392 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 INTS2Q9H0H0 1204 aaKnown RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 SLC25A18Q9H1K4 315 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 BOLA2Q9H3K6 86 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 CHMP4BQ9H444 224 aaKnown RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 SERHL2Q9H4I8 314 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 STN1Q9H668 368 aaKnown RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 CCDC134Q9H6E4 229 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 SLC28A3Q9HAS3 691 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 ZBTB40Q9NUA8 1239 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 MTMR4Q9NYA4 1195 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 NCDNQ9UBB6 729 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 CLIP2Q9UDT6 1046 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 ISY1Q9ULR0 285 aaKnown RBP3.4□□□□□ -1.87
CNOT1-221ENST00000569924 DDX19BQ9UMR2 479 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 Q9Y3F1 56 aa3.4□□□□□ -1.87
CNOT1-221ENST00000569924 RIPK3Q9Y572 518 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms