RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 GRIK2Q13002 908 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 POLD3Q15054 466 aaPredicted RBP13.3□□□□□ -0.28
CNOT1-220ENST00000569916 POM121L1PQ3SYA9 428 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 PPM1JQ5JR12 505 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 ERMARDQ5T6L9 678 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 AGBL4Q5VU57 503 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 DAB2IPQ5VWQ8 1189 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.3□□□□□ -0.28
CNOT1-220ENST00000569916 MINDY1Q8N5J2 469 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 PCDH20Q8N6Y1 951 aaKnown RBP13.3□□□□□ -0.28
CNOT1-220ENST00000569916 OR2I1PQ8NGU4 316 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 OR14C36Q8NHC7 312 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 CCDC114Q96M63 670 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 KCTD15Q96SI1 283 aaPredicted RBP13.3□□□□□ -0.28
CNOT1-220ENST00000569916 DNAJC7Q99615 494 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 DHX35Q9H5Z1 703 aaKnown RBP13.3□□□□□ -0.28
CNOT1-220ENST00000569916 CATSPERBQ9H7T0 1116 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 OSGEPQ9NPF4 335 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 PCSK1NQ9UHG2 260 aa13.3□□□□□ -0.28
CNOT1-220ENST00000569916 FCF1Q9Y324 198 aaKnown RBP13.3□□□□□ -0.28
CNOT1-220ENST00000569916 FARP1Q9Y4F1 1045 aaPredicted RBP13.3□□□□□ -0.28
CNOT1-220ENST00000569916 ASCC3Q8N3C0 2202 aaKnown RBP13.29□□□□□ -0.28
CNOT1-220ENST00000569916 DOCK9Q9BZ29 2069 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 EIF3CLB5ME19 914 aaKnown RBP13.29□□□□□ -0.28
CNOT1-220ENST00000569916 SLC7A4O43246 635 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 PLRG1O43660 514 aaKnown RBP13.29□□□□□ -0.28
CNOT1-220ENST00000569916 KDELR3O43731 214 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 PRPSAP2O60256 369 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 EIF4A3P38919 411 aaKnown RBP13.29□□□□□ -0.28
CNOT1-220ENST00000569916 CCR5P51681 352 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 ATXN3P54252 364 aaPredicted RBP13.29□□□□□ -0.28
CNOT1-220ENST00000569916 PPP2CBP62714 309 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 PPP2CAP67775 309 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 CNTN1Q12860 1018 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 UAP1L1Q3KQV9 507 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 CCDC122Q5T0U0 273 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 ALKBH5Q6P6C2 394 aaKnown RBP13.29□□□□□ -0.28
CNOT1-220ENST00000569916 DPY19L3Q6ZPD9 716 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 UMODL1-AS1Q8N2C9 162 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 TMIEQ8NEW7 156 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 ARRDC3Q96B67 414 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 ARHGEF26Q96DR7 871 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 EIF3CQ99613 913 aaKnown RBP13.29□□□□□ -0.28
CNOT1-220ENST00000569916 KLC2Q9H0B6 622 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 EBF2Q9HAK2 575 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 TM9SF3Q9HD45 589 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 DNAAF2Q9NVR5 837 aaKnown RBP13.29□□□□□ -0.28
CNOT1-220ENST00000569916 IL36AQ9UHA7 158 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 WASF2Q9Y6W5 498 aa13.29□□□□□ -0.28
CNOT1-220ENST00000569916 A0A1W2PPC4 97 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 RASA4BC9J798 803 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 EEF2KO00418 725 aaKnown RBP13.28□□□□□ -0.28
CNOT1-220ENST00000569916 RASA4O43374 803 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 GJB3O75712 270 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 PRNPP04156 253 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 CYP1A2P05177 515 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 TCF4P15884 667 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 IL1R2P27930 398 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 PCK1P35558 622 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 RECQLP46063 649 aaPredicted RBP13.28□□□□□ -0.28
CNOT1-220ENST00000569916 CCNHP51946 323 aaPredicted RBP13.28□□□□□ -0.28
CNOT1-220ENST00000569916 GEMIN4P57678 1058 aaKnown RBP13.28□□□□□ -0.28
CNOT1-220ENST00000569916 YBEYP58557 167 aaPredicted RBP13.28□□□□□ -0.28
CNOT1-220ENST00000569916 TAS2R38P59533 333 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 ACAP1Q15027 740 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 ASTE1Q2TB18 679 aaPredicted RBP13.28□□□□□ -0.28
CNOT1-220ENST00000569916 PARP15Q460N3 678 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 CARD16Q5EG05 197 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 PIP5KL1Q5T9C9 394 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 LAYNQ6UX15 382 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 LEKR1Q6ZMV7 388 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 PSTKQ8IV42 348 aaKnown RBP13.28□□□□□ -0.28
CNOT1-220ENST00000569916 NIPA2Q8N8Q9 360 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 OR8K1Q8NGG5 319 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 GRIN3AQ8TCU5 1115 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 ISG20Q96AZ6 181 aaKnown RBP13.28□□□□□ -0.28
CNOT1-220ENST00000569916 HMCESQ96FZ2 354 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 NCAPGQ9BPX3 1015 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 NUP85Q9BW27 656 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 TM6SF2Q9BZW4 377 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 ZDHHC5Q9C0B5 715 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 KDM4CQ9H3R0 1056 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 LRRC19Q9H756 370 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 ABHD10Q9NUJ1 306 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 ANAPC7Q9UJX3 599 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 HPCAL4Q9UM19 191 aa13.28□□□□□ -0.28
CNOT1-220ENST00000569916 TBC1D3DA0A087WVF3 549 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 TBC1D3IA0A087WXS9 549 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 TBC1D3EA0A087X179 549 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 TBC1D3KA0A087X1G2 549 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 A0A1B0GVT2 93 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 SSU72P8A0A1W2PR75 194 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 TBC1D3FA6NER0 549 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-220ENST00000569916 ZSCAN5CA6NGD5 496 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-220ENST00000569916 TBC1D3LB9A6J9 549 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 KPNA3O00505 521 aaPredicted RBP13.27□□□□□ -0.29
CNOT1-220ENST00000569916 LATO43561 262 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 OPHN1O60890 802 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 MFAP3LO75121 409 aa13.27□□□□□ -0.29
CNOT1-220ENST00000569916 LEFTY1O75610 366 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms