RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 HSPBAP1Q96EW2 488 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 MNTQ99583 582 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 IARS2Q9NSE4 1012 aaKnown RBP6.78□□□□□ -1.32
SMG1-217ENST00000569764 TBCCD1Q9NVR7 557 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 PTPRZ1P23471 2315 aaPredicted RBP6.78□□□□□ -1.32
SMG1-217ENST00000569764 TRIM43BA6NCK2 446 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 ST8SIA5O15466 376 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 SUPT3HO75486 399 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 ERAL1O75616 437 aaKnown RBP6.78□□□□□ -1.32
SMG1-217ENST00000569764 INHBAP08476 426 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 CTNNA2P26232 953 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 PBX1P40424 430 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 ABCG1P45844 678 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 CLCN3P51790 818 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 DNAJC3Q13217 504 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 LASP1Q14847 261 aaKnown RBP6.78□□□□□ -1.32
SMG1-217ENST00000569764 TSTQ16762 297 aaKnown RBP6.78□□□□□ -1.32
SMG1-217ENST00000569764 DUOXA2Q1HG44 320 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 ZNF805Q5CZA5 627 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 PPP6R3Q5H9R7 873 aaPredicted RBP6.78□□□□□ -1.32
SMG1-217ENST00000569764 CYB5D1Q6P9G0 228 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 ATG14Q6ZNE5 492 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 ECHDC2Q86YB7 292 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 VSTM4Q8IW00 320 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 CHERPQ8IWX8 916 aaKnown RBP6.78□□□□□ -1.32
SMG1-217ENST00000569764 SLC4A11Q8NBS3 891 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 PRCCQ92733 491 aaPredicted RBP6.78□□□□□ -1.32
SMG1-217ENST00000569764 SIPA1Q96FS4 1042 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 CDC6Q99741 560 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 BTBD2Q9BX70 525 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 CENPHQ9H3R5 247 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 CNGB3Q9NQW8 809 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 ADPRHL2Q9NX46 363 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 VAV3Q9UKW4 847 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 A0A087WV62 115 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 MAN1A2O60476 641 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 PEX10O60683 326 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 GUCY1B2O75343 617 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 ALPPL2P10696 532 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 JUPP14923 745 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 CD19P15391 556 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 LIG3P49916 1009 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 CDK7P50613 346 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 SLC14A1Q13336 389 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 EML3Q32P44 896 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 C6orf132Q5T0Z8 1188 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 SLC36A4Q6YBV0 504 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 BEND4Q6ZU67 534 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 ADGRG6Q86SQ4 1221 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 SLC15A3Q8IY34 581 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 PRR18Q8N4B5 295 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 OR2C3Q8N628 320 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 TC2NQ8N9U0 490 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 LRRN4CLQ8ND94 238 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 HTRA1Q92743 480 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 COPS5Q92905 334 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 FUBP3Q96I24 572 aaKnown RBP eCLIP6.78□□□□□ -1.32
SMG1-217ENST00000569764 DMRTB1Q96MA1 342 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 TSC22D3Q99576 134 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 SEPT5Q99719 369 aaPredicted RBP6.78□□□□□ -1.32
SMG1-217ENST00000569764 HNRNPABQ99729 332 aaKnown RBP6.78□□□□□ -1.32
SMG1-217ENST00000569764 PIP5K1AQ99755 562 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 CARD6Q9BX69 1037 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 YIPF3Q9GZM5 350 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 IKZF4Q9H2S9 585 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 FBXO44Q9H4M3 255 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 ASB7Q9H672 318 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 PDE7BQ9NP56 450 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 IL20Q9NYY1 176 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 ANAPC5Q9UJX4 755 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 SLC39A10Q9ULF5 831 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 RNF112Q9ULX5 631 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 ANKRD6Q9Y2G4 727 aa6.78□□□□□ -1.32
SMG1-217ENST00000569764 DICER1Q9UPY3 1922 aaKnown RBP6.77□□□□□ -1.33
SMG1-217ENST00000569764 A0A0U1RQF3 1178 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 TMEM247A6NEH6 219 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 CFAP99D6REC4 459 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 NOL3O60936 208 aaKnown RBP6.77□□□□□ -1.33
SMG1-217ENST00000569764 EDNRBP24530 442 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 PEX2P28328 305 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 TTKP33981 857 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 CACNB1Q02641 598 aaPredicted RBP6.77□□□□□ -1.33
SMG1-217ENST00000569764 RIPK1Q13546 671 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 RCN2Q14257 317 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 CASP8Q14790 479 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 ZMYND11Q15326 602 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 LRRC31Q6UY01 552 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 ZNF704Q6ZNC4 412 aaPredicted RBP6.77□□□□□ -1.33
SMG1-217ENST00000569764 DDX53Q86TM3 631 aaKnown RBP6.77□□□□□ -1.33
SMG1-217ENST00000569764 CDH24Q86UP0 819 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 MLKLQ8NB16 471 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 COLGALT1Q8NBJ5 622 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 ZSWIM2Q8NEG5 633 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 GDPD5Q8WTR4 605 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 PI4K2AQ9BTU6 479 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 TRIM9Q9C026 710 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 C11orf16Q9NQ32 467 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 GDE1Q9NZC3 331 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 A0A087WZ62 844 aa6.77□□□□□ -1.33
SMG1-217ENST00000569764 FAM47DPA6NHR8 397 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms