RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 KRT72Q14CN4 511 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 LINC01559Q495D7 138 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 CTXN3Q4LDR2 81 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 PCID2Q5JVF3 399 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 MROH9Q5TGP6 573 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 FAM171A1Q5VUB5 890 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 SNX30Q5VWJ9 437 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 FYB2Q5VWT5 728 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 NAPEPLDQ6IQ20 393 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 DENND5AQ6IQ26 1287 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 ZNF280DQ6N043 979 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 RWDD4Q6NW29 188 aaKnown RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 CASC4Q6P4E1 433 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 PKN3Q6P5Z2 889 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 FAM47EQ6ZV65 393 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 C14orf80Q86SX3 495 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 LCA5Q86VQ0 697 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 BPHLQ86WA6 291 aaPredicted RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 NUDCD3Q8IVD9 361 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 SCN4BQ8IWT1 228 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 NDUFAF2Q8N183 169 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 ANKLE1Q8NAG6 615 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 NETO2Q8NC67 525 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 STKLD1Q8NE28 680 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 DBF4BQ8NFT6 615 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 OR52K1Q8NGK4 314 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 OR6Y1Q8NGX8 325 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 HASPINQ8TF76 798 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 DEPDC1BQ8WUY9 529 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 INPP5DQ92835 1189 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 PTPRN2Q92932 1015 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 AZIN2Q96A70 460 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 E2F7Q96AV8 911 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 TADA1Q96BN2 335 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 CERS2Q96G23 380 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 BTN2A3PQ96KV6 586 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 RMDN2Q96LZ7 410 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 FAM161BQ96MY7 647 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 AGAP3Q96P47 875 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 FAM111AQ96PZ2 611 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 LRRC37BQ96QE4 947 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 RANBP9Q96S59 729 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 KLF6Q99612 283 aaPredicted RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 SIKE1Q9BRV8 207 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 TTLL2Q9BWV7 592 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 TSSK1BQ9BXA7 367 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 MRPL9Q9BYD2 267 aaKnown RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 GPR62Q9BZJ7 368 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 UBE2OQ9C0C9 1292 aaKnown RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 SIK2Q9H0K1 926 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 RNF208Q9H0X6 261 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 SLC25A51Q9H1U9 297 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 NOL6Q9H6R4 1146 aaKnown RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 TLE6Q9H808 572 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 ECT2Q9H8V3 914 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 KCNK13Q9HB14 408 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 ATP13A1Q9HD20 1204 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 PRDM5Q9NQX1 630 aaPredicted RBP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 ENTPD7Q9NQZ7 604 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 KLC4Q9NSK0 619 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 TXLNGQ9NUQ3 528 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.48□□□□□ -1.53
SF3B3-213ENST00000569687 TMEM248Q9NWD8 314 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 MARCH5Q9NX47 278 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 NSMCE4AQ9NXX6 385 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 KCNK4Q9NYG8 393 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 HSFX1Q9UBD0 423 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 DNAJB4Q9UDY4 337 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 SFMBT1Q9UHJ3 866 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 OGDHLQ9ULD0 1010 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 CHKBQ9Y259 395 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 BACE2Q9Y5Z0 518 aa5.48□□□□□ -1.53
SF3B3-213ENST00000569687 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 HRO43593 1189 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 TIMM44O43615 452 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 NDUFB5O43674 189 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 TLL1O43897 1013 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 PLIN3O60664 434 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 GLRA3O75311 464 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 UNC5CO95185 931 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 PAPSS2O95340 614 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 VNN2O95498 520 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 MYCP01106 439 aaPredicted RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 EPOP01588 193 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ALDOAP04075 364 aaKnown RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 PRKCGP05129 697 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 OR4Q2P0C623 313 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ERVK-10P10266 1014 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 COL6A2P12110 1019 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 IGFBP4P22692 258 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 GRK2P25098 689 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 MPSTP25325 297 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 SLC11A1P49279 550 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 TUFMP49411 452 aaKnown RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 RASSF2P50749 326 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 PAPOLAP51003 745 aaKnown RBP5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ARFIP2P53365 341 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 LIMK2P53671 638 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 RAB15P59190 212 aa5.47□□□□□ -1.53
SF3B3-213ENST00000569687 ELF3P78545 371 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms