RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 GOLGA6L19H0YKK7 550 aa30■■■□□ 2.39
RAB40C-211ENST00000568586 VILLO15195 856 aa30■■■□□ 2.39
RAB40C-211ENST00000568586 PRNPP04156 253 aa30■■■□□ 2.39
RAB40C-211ENST00000568586 SCYL2Q6P3W7 929 aa30■■■□□ 2.39
RAB40C-211ENST00000568586 RTL3Q8N8U3 475 aaKnown RBP30■■■□□ 2.39
RAB40C-211ENST00000568586 IL21RQ9HBE5 538 aa30■■■□□ 2.39
RAB40C-211ENST00000568586 DNAI1Q9UI46 699 aa30■■■□□ 2.39
RAB40C-211ENST00000568586 PLK4O00444 970 aa29.99■■■□□ 2.39
RAB40C-211ENST00000568586 RAMP2O60895 175 aa29.99■■■□□ 2.39
RAB40C-211ENST00000568586 SKILP12757 684 aa29.99■■■□□ 2.39
RAB40C-211ENST00000568586 DESP17661 470 aa29.99■■■□□ 2.39
RAB40C-211ENST00000568586 HTR7P34969 479 aa29.99■■■□□ 2.39
RAB40C-211ENST00000568586 NUDT1P36639 197 aa29.99■■■□□ 2.39
RAB40C-211ENST00000568586 ZNF252P-AS1Q0IIN9 211 aa29.99■■■□□ 2.39
RAB40C-211ENST00000568586 PIP5KL1Q5T9C9 394 aa29.99■■■□□ 2.39
RAB40C-211ENST00000568586 DPY19L3Q6ZPD9 716 aa29.99■■■□□ 2.39
RAB40C-211ENST00000568586 TRIM69Q86WT6 500 aa29.99■■■□□ 2.39
RAB40C-211ENST00000568586 ARFGAP1Q8N6T3 406 aa29.99■■■□□ 2.39
RAB40C-211ENST00000568586 CHST14Q8NCH0 376 aa29.99■■■□□ 2.39
RAB40C-211ENST00000568586 NOL6Q9H6R4 1146 aaKnown RBP29.99■■■□□ 2.39
RAB40C-211ENST00000568586 ARHGAP20Q9P2F6 1191 aa29.99■■■□□ 2.39
RAB40C-211ENST00000568586 CAPN11Q9UMQ6 739 aa29.99■■■□□ 2.39
RAB40C-211ENST00000568586 WASF3Q9UPY6 502 aa29.99■■■□□ 2.39
RAB40C-211ENST00000568586 SNX11Q9Y5W9 270 aa29.99■■■□□ 2.39
RAB40C-211ENST00000568586 TBC1D3DA0A087WVF3 549 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 TBC1D3IA0A087WXS9 549 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 TBC1D3EA0A087X179 549 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 TBC1D3KA0A087X1G2 549 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 TBC1D3FA6NER0 549 aaPredicted RBP29.98■■■□□ 2.39
RAB40C-211ENST00000568586 TBC1D3LB9A6J9 549 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 BNIP3LO60238 219 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 TBC1D3HP0C7X1 549 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 EPHB2P29323 1055 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 CTSKP43235 329 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 GEMIN4P57678 1058 aaKnown RBP29.98■■■□□ 2.39
RAB40C-211ENST00000568586 TAS2R38P59533 333 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 ZBED6P86452 979 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 TBC1D3GQ6DHY5 549 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 TBC1D3CQ6IPX1 549 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 TBC1D3Q8IZP1 549 aaPredicted RBP29.98■■■□□ 2.39
RAB40C-211ENST00000568586 EPAS1Q99814 870 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 HDAC8Q9BY41 377 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 TNKS2Q9H2K2 1166 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 FNDC3AQ9Y2H6 1198 aaKnown RBP29.98■■■□□ 2.39
RAB40C-211ENST00000568586 WASF2Q9Y6W5 498 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 EPG5Q9HCE0 2579 aa29.98■■■□□ 2.39
RAB40C-211ENST00000568586 A0A1W2PR77 199 aa29.97■■■□□ 2.39
RAB40C-211ENST00000568586 EIF3CLB5ME19 914 aaKnown RBP29.97■■■□□ 2.39
RAB40C-211ENST00000568586 MYBL1P10243 752 aa29.97■■■□□ 2.39
RAB40C-211ENST00000568586 PPP2CBP62714 309 aa29.97■■■□□ 2.39
RAB40C-211ENST00000568586 PPP2CAP67775 309 aa29.97■■■□□ 2.39
RAB40C-211ENST00000568586 CCDC15Q0P6D6 951 aa29.97■■■□□ 2.39
RAB40C-211ENST00000568586 POLD3Q15054 466 aaPredicted RBP29.97■■■□□ 2.39
RAB40C-211ENST00000568586 ZNF423Q2M1K9 1284 aa29.97■■■□□ 2.39
RAB40C-211ENST00000568586 CARD16Q5EG05 197 aa29.97■■■□□ 2.39
RAB40C-211ENST00000568586 KCNT1Q5JUK3 1230 aa29.97■■■□□ 2.39
RAB40C-211ENST00000568586 NEK5Q6P3R8 708 aa29.97■■■□□ 2.39
RAB40C-211ENST00000568586 DNAAF5Q86Y56 855 aa29.97■■■□□ 2.39
RAB40C-211ENST00000568586 TRIM11Q96F44 468 aa29.97■■■□□ 2.39
RAB40C-211ENST00000568586 SLC6A18Q96N87 628 aa29.97■■■□□ 2.39
RAB40C-211ENST00000568586 EIF3CQ99613 913 aaKnown RBP29.97■■■□□ 2.39
RAB40C-211ENST00000568586 PREBQ9HCU5 417 aa29.97■■■□□ 2.39
RAB40C-211ENST00000568586 TM7SF3Q9NS93 570 aa29.97■■■□□ 2.39
RAB40C-211ENST00000568586 CNOT8Q9UFF9 292 aaKnown RBP29.97■■■□□ 2.39
RAB40C-211ENST00000568586 IL36AQ9UHA7 158 aa29.97■■■□□ 2.39
RAB40C-211ENST00000568586 ANGPTL2Q9UKU9 493 aa29.97■■■□□ 2.39
RAB40C-211ENST00000568586 RNF103O00237 685 aa29.96■■■□□ 2.39
RAB40C-211ENST00000568586 ATMINO43313 823 aaPredicted RBP29.96■■■□□ 2.39
RAB40C-211ENST00000568586 KDELR3O43731 214 aa29.96■■■□□ 2.39
RAB40C-211ENST00000568586 SH3BP5O60239 455 aa29.96■■■□□ 2.39
RAB40C-211ENST00000568586 CBFA2T3O75081 653 aa29.96■■■□□ 2.39
RAB40C-211ENST00000568586 PSMA2P25787 234 aa29.96■■■□□ 2.39
RAB40C-211ENST00000568586 RECQLP46063 649 aaPredicted RBP29.96■■■□□ 2.39
RAB40C-211ENST00000568586 YBEYP58557 167 aaPredicted RBP29.96■■■□□ 2.39
RAB40C-211ENST00000568586 POM121L1PQ3SYA9 428 aa29.96■■■□□ 2.39
RAB40C-211ENST00000568586 UMODL1-AS1Q8N2C9 162 aa29.96■■■□□ 2.39
RAB40C-211ENST00000568586 ARRDC3Q96B67 414 aa29.96■■■□□ 2.39
RAB40C-211ENST00000568586 HPCAL4Q9UM19 191 aa29.96■■■□□ 2.39
RAB40C-211ENST00000568586 DMTF1Q9Y222 760 aa29.96■■■□□ 2.39
RAB40C-211ENST00000568586 SCINQ9Y6U3 715 aa29.96■■■□□ 2.39
RAB40C-211ENST00000568586 ZSCAN5CA6NGD5 496 aaPredicted RBP29.95■■■□□ 2.39
RAB40C-211ENST00000568586 WNT1P04628 370 aa29.95■■■□□ 2.39
RAB40C-211ENST00000568586 ARSIQ5FYB1 569 aa29.95■■■□□ 2.39
RAB40C-211ENST00000568586 NAXDQ8IW45 347 aa29.95■■■□□ 2.39
RAB40C-211ENST00000568586 VOPP1Q96AW1 172 aa29.95■■■□□ 2.39
RAB40C-211ENST00000568586 HEPHQ9BQS7 1158 aa29.95■■■□□ 2.39
RAB40C-211ENST00000568586 TRIM7Q9C029 511 aa29.95■■■□□ 2.39
RAB40C-211ENST00000568586 CATSPERBQ9H7T0 1116 aa29.95■■■□□ 2.39
RAB40C-211ENST00000568586 IFNKQ9P0W0 207 aa29.95■■■□□ 2.39
RAB40C-211ENST00000568586 FCF1Q9Y324 198 aaKnown RBP29.95■■■□□ 2.39
RAB40C-211ENST00000568586 ACTL7AQ9Y615 435 aa29.95■■■□□ 2.39
RAB40C-211ENST00000568586 PLXNA2O75051 1894 aa29.95■■■□□ 2.38
RAB40C-211ENST00000568586 KPNA3O00505 521 aaPredicted RBP29.94■■■□□ 2.38
RAB40C-211ENST00000568586 WNT9AO14904 365 aa29.94■■■□□ 2.38
RAB40C-211ENST00000568586 FGF10O15520 208 aaPredicted RBP29.94■■■□□ 2.38
RAB40C-211ENST00000568586 DFNA5O60443 496 aa29.94■■■□□ 2.38
RAB40C-211ENST00000568586 LEFTY1O75610 366 aa29.94■■■□□ 2.38
RAB40C-211ENST00000568586 CD38P28907 300 aa29.94■■■□□ 2.38
RAB40C-211ENST00000568586 LAYNQ6UX15 382 aa29.94■■■□□ 2.38
RAB40C-211ENST00000568586 PRPF39Q86UA1 669 aaKnown RBP29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms