RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 CCSER2Q9H7U1 834 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 KCNK13Q9HB14 408 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 IARS2Q9NSE4 1012 aaKnown RBP18.43■□□□□ 0.54
SMPD3-211ENST00000568373 KLC4Q9NSK0 619 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 TXLNGQ9NUQ3 528 aa18.43■□□□□ 0.54
SMPD3-211ENST00000568373 DRGXA6NNA5 263 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 ADAM12O43184 909 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 PLIN3O60664 434 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 EFEMP2O95967 443 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 ARFIP2P53365 341 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 OCRLQ01968 901 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 POU6F1Q14863 301 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 POTEHQ6S545 545 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 ASRGL1Q7L266 308 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 DEFB128Q7Z7B8 93 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 TBC1D1Q86TI0 1168 aaPredicted RBP18.42■□□□□ 0.54
SMPD3-211ENST00000568373 ATXN7L3BQ96GX2 97 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 MRGPRX2Q96LB1 330 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 MCMBPQ9BTE3 642 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 SLC25A51Q9H1U9 297 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 MTRRQ9UBK8 725 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 ZNF212Q9UDV6 495 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 J3KR12 359 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 TIMM44O43615 452 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 SNNO75324 88 aaPredicted RBP18.42■□□□□ 0.54
SMPD3-211ENST00000568373 ATP5HO75947 161 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 HNRNPH1P31943 449 aaKnown RBP18.42■□□□□ 0.54
SMPD3-211ENST00000568373 KPNA1P52294 538 aaPredicted RBP18.42■□□□□ 0.54
SMPD3-211ENST00000568373 IRX4P78413 519 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 MTA1Q13330 715 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 USP41Q3LFD5 358 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 RANBP10Q6VN20 620 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 CMC1Q7Z7K0 106 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 PTCD2Q8WV60 388 aaKnown RBP18.42■□□□□ 0.54
SMPD3-211ENST00000568373 RPRD1AQ96P16 312 aaPredicted RBP18.42■□□□□ 0.54
SMPD3-211ENST00000568373 NSMCE4AQ9NXX6 385 aa18.42■□□□□ 0.54
SMPD3-211ENST00000568373 MTO1Q9Y2Z2 717 aaKnown RBP18.42■□□□□ 0.54
SMPD3-211ENST00000568373 CCDC78A2IDD5 438 aa18.41■□□□□ 0.54
SMPD3-211ENST00000568373 F7P08709 466 aaPredicted RBP18.41■□□□□ 0.54
SMPD3-211ENST00000568373 FASTKD1Q53R41 847 aaKnown RBP18.41■□□□□ 0.54
SMPD3-211ENST00000568373 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.41■□□□□ 0.54
SMPD3-211ENST00000568373 MTDHQ86UE4 582 aaKnown RBP18.41■□□□□ 0.54
SMPD3-211ENST00000568373 PPHLN1Q8NEY8 458 aaKnown RBP18.41■□□□□ 0.54
SMPD3-211ENST00000568373 CEP295NLQ96MC4 621 aa18.41■□□□□ 0.54
SMPD3-211ENST00000568373 TMEM120AQ9BXJ8 343 aa18.41■□□□□ 0.54
SMPD3-211ENST00000568373 RNF208Q9H0X6 261 aa18.41■□□□□ 0.54
SMPD3-211ENST00000568373 SP110Q9HB58 689 aa18.41■□□□□ 0.54
SMPD3-211ENST00000568373 MRM3Q9HC36 420 aaKnown RBP18.41■□□□□ 0.54
SMPD3-211ENST00000568373 ZFP69BQ9UJL9 534 aa18.41■□□□□ 0.54
SMPD3-211ENST00000568373 MYLKQ15746 1914 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 GOLGA8TH3BQL2 631 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 UPP2O95045 317 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 PROCP04070 461 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 PRKCGP05129 697 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 NQO1P15559 274 aaKnown RBP18.4■□□□□ 0.54
SMPD3-211ENST00000568373 KCNJ2P63252 427 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 ELF3P78545 371 aaPredicted RBP18.4■□□□□ 0.54
SMPD3-211ENST00000568373 SLC10A7Q0GE19 358 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 MARC1Q5VT66 337 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 KDELC1Q6UW63 502 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 CCDC91Q7Z6B0 441 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 PSMG2Q969U7 264 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 IMP4Q96G21 291 aaKnown RBP18.4■□□□□ 0.54
SMPD3-211ENST00000568373 VPS39Q96JC1 886 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 CDK5RAP1Q96SZ6 601 aaKnown RBP18.4■□□□□ 0.54
SMPD3-211ENST00000568373 NT5MQ9NPB1 228 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 ARHGEF3Q9NR81 526 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 HBS1LQ9Y450 684 aaKnown RBP18.4■□□□□ 0.54
SMPD3-211ENST00000568373 TCAF1Q9Y4C2 921 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 BACE2Q9Y5Z0 518 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 RAMP2O60895 175 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 MPOP05164 745 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 CCL5P13501 91 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 RPL17P18621 184 aaKnown RBP18.4■□□□□ 0.54
SMPD3-211ENST00000568373 OR1D2P34982 312 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 WNT3AP56704 352 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 STX3Q13277 289 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 PARP15Q460N3 678 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 TAF1BQ53T94 588 aaPredicted RBP18.4■□□□□ 0.54
SMPD3-211ENST00000568373 MBLAC2Q68D91 279 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 NADSYN1Q6IA69 706 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 SLC39A5Q6ZMH5 540 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 CLNKQ7Z7G1 428 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 RNF168Q8IYW5 571 aaPredicted RBP18.4■□□□□ 0.54
SMPD3-211ENST00000568373 PABPC5Q96DU9 382 aaKnown RBP18.4■□□□□ 0.54
SMPD3-211ENST00000568373 VN1R3Q9BXE9 311 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 TMEM216Q9P0N5 145 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 HEY2Q9UBP5 337 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 NUMBLQ9Y6R0 609 aa18.4■□□□□ 0.54
SMPD3-211ENST00000568373 MYL2P10916 166 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 ABCG1P45844 678 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 TUFMP49411 452 aaKnown RBP18.39■□□□□ 0.53
SMPD3-211ENST00000568373 PCLAFQ15004 111 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 POLD3Q15054 466 aaPredicted RBP18.39■□□□□ 0.53
SMPD3-211ENST00000568373 ZCCHC23Q6ZST2 131 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 CIR1Q86X95 450 aaPredicted RBP18.39■□□□□ 0.53
SMPD3-211ENST00000568373 ZNF354CQ86Y25 554 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 CRLF3Q8IUI8 442 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 CNTN4Q8IWV2 1026 aa18.39■□□□□ 0.53
SMPD3-211ENST00000568373 KIF2BQ8N4N8 673 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms