RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 LSP1P33241 339 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 MSH2P43246 934 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 HARS2P49590 506 aaKnown RBP14.9□□□□□ -0.02
COMMD4-221ENST00000567935 SLC18A1P54219 525 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 NAB1Q13506 487 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 PARP15Q460N3 678 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 PABPC1LQ4VXU2 614 aaKnown RBP14.9□□□□□ -0.02
COMMD4-221ENST00000567935 STEAP4Q687X5 459 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 ADGRD1Q6QNK2 874 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 TMEM184AQ6ZMB5 413 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 ZNF771Q7L3S4 317 aaPredicted RBP14.9□□□□□ -0.02
COMMD4-221ENST00000567935 RTL10Q7L3V2 364 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 LINC00523Q86TU6 105 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 CCDC33Q8N5R6 958 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 PDCD7Q8N8D1 485 aaKnown RBP14.9□□□□□ -0.02
COMMD4-221ENST00000567935 GSDMBQ8TAX9 411 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 STAMBPL1Q96FJ0 436 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 SIGLEC10Q96LC7 697 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 XPO6Q96QU8 1125 aaKnown RBP14.9□□□□□ -0.02
COMMD4-221ENST00000567935 PRMT1Q99873 361 aaKnown RBP14.9□□□□□ -0.02
COMMD4-221ENST00000567935 SLC39A8Q9C0K1 460 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 ZBP1Q9H171 429 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 CCSER2Q9H7U1 834 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 LRRC40Q9H9A6 602 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 SSU72Q9NP77 194 aaKnown RBP14.9□□□□□ -0.02
COMMD4-221ENST00000567935 HAUS2Q9NVX0 235 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 VANGL2Q9ULK5 521 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 LZTS1Q9Y250 596 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 IKBKGQ9Y6K9 419 aa14.9□□□□□ -0.02
COMMD4-221ENST00000567935 TCRBV9S1A1TA0A576 114 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 F5H5T6 163 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 POC1B-GALNT4F8VUJ3 575 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 DFFAO00273 331 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 MAFKO60675 156 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 BANF1O75531 89 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 FGF18O76093 207 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 TBX18O95935 607 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 JCHAINP01591 159 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 CCNB1P14635 433 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 GCAP28676 217 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 ERVFC1P60507 584 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 FRG1Q14331 258 aaKnown RBP14.89□□□□□ -0.03
COMMD4-221ENST00000567935 TMED2Q15363 201 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 SKIDA1Q1XH10 827 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 RABGAP1LQ5R372 815 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 HP1BP3Q5SSJ5 553 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-221ENST00000567935 LGSNQ5TDP6 509 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 NAPEPLDQ6IQ20 393 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 C14orf80Q86SX3 495 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 CHSY1Q86X52 802 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 TP53INP2Q8IXH6 220 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 LRRN4Q8WUT4 740 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 NSMCE1Q8WV22 266 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 SLC44A1Q8WWI5 657 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 PSMG2Q969U7 264 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 COL26A1Q96A83 441 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 ALKBH8Q96BT7 664 aaKnown RBP14.89□□□□□ -0.03
COMMD4-221ENST00000567935 CELF6Q96J87 481 aaKnown RBP14.89□□□□□ -0.03
COMMD4-221ENST00000567935 FCRL5Q96RD9 977 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 PAFAH2Q99487 392 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 CDCA3Q99618 268 aaPredicted RBP14.89□□□□□ -0.03
COMMD4-221ENST00000567935 SELENOSQ9BQE4 189 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 ZNF180Q9UJW8 692 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 SMG5Q9UPR3 1016 aaKnown RBP14.89□□□□□ -0.03
COMMD4-221ENST00000567935 INSL5Q9Y5Q6 135 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 SHROOM3Q8TF72 1996 aa14.89□□□□□ -0.03
COMMD4-221ENST00000567935 IQANK1A0A1B0GTG1 560 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 MAGEB16A2A368 324 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 RASA4BC9J798 803 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 ZBTB24O43167 697 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-221ENST00000567935 RASA4O43374 803 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 ACSL4O60488 711 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 NEBLO76041 1014 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 C1RP00736 705 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 ADH1AP07327 375 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 INHBAP08476 426 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 PFKLP17858 780 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 PGAM1P18669 254 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 TACR2P21452 398 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 NPY2RP49146 381 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 RENBPP51606 427 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 GEMP55040 296 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 TNK2Q07912 1038 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 DMTNQ08495 405 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 TWF1Q12792 350 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 ZBTB17Q13105 803 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 HNRNPDQ14103 355 aaKnown RBP14.88□□□□□ -0.03
COMMD4-221ENST00000567935 RAP1GAP2Q684P5 730 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 KCTD11Q693B1 232 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 FBXL22Q6P050 247 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 CCDC149Q6ZUS6 474 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 TRABD2AQ86V40 505 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 IGDCC3Q8IVU1 814 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 CCDC117Q8IWD4 279 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-221ENST00000567935 ZSCAN18Q8TBC5 510 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-221ENST00000567935 TTC17Q96AE7 1141 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 CFAP36Q96G28 342 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 SGSM3Q96HU1 749 aa14.88□□□□□ -0.03
COMMD4-221ENST00000567935 RPRD1AQ96P16 312 aaPredicted RBP14.88□□□□□ -0.03
COMMD4-221ENST00000567935 EPN3Q9H201 632 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms