RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	FAM72B	Q86X60	149 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	NAXD	Q8IW45	347 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	CCDC185	Q8N715	623 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	OR2A12	Q8NGT7	310 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	SETD7	Q8WTS6	366 aa	Known RBP	7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	NTAN1	Q96AB6	310 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	SERAC1	Q96JX3	654 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	CAMK1G	Q96NX5	476 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	CNPY3	Q9BT09	278 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	SYT11	Q9BT88	431 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	FUCA2	Q9BTY2	467 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	ACE2	Q9BYF1	805 aa	Predicted RBP	7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	MAGEB5	Q9BZ81	275 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	MAGEH1	Q9H213	219 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	EBF2	Q9HAK2	575 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	ATP13A1	Q9HD20	1204 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	AASDHPPT	Q9NRN7	309 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	TM7SF3	Q9NS93	570 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	PARVA	Q9NVD7	372 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	DNAI1	Q9UI46	699 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	HPCAL4	Q9UM19	191 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	PCDHGB2	Q9Y5G2	931 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	ASXL3	Q9C0F0	2248 aa		7.07	□□□□□ -1.28
SF3B3-209	ENST00000567635	CXorf51A	A0A1B0GTR3	108 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	SYCE3	A1L190	88 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	LRRC53	A6NM62	1247 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	TMCO5B	A8MYB1	307 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	C10orf142	B7Z368	130 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	KPNA3	O00505	521 aa	Predicted RBP	7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	CCP110	O43303	1012 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	LAT	O43561	262 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	PLRG1	O43660	514 aa	Known RBP	7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	LRIG2	O94898	1065 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	FTL	P02792	175 aa	Predicted RBP	7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	CTSL	P07711	333 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	GZMA	P12544	262 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	CD38	P28907	300 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	L1CAM	P32004	1257 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	ACVRL1	P37023	503 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	CTSK	P43235	329 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	MAPKAPK2	P49137	400 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	DNA2	P51530	1060 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	AIF1	P55008	147 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	GEMIN4	P57678	1058 aa	Known RBP	7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	FAM193A	P78312	1265 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	KLHL30	Q0D2K2	578 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	SCAP	Q12770	1279 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	FOXC1	Q12948	553 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	MAMLD1	Q13495	774 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	POLD3	Q15054	466 aa	Predicted RBP	7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	ASIC2	Q16515	512 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	ZNF423	Q2M1K9	1284 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	SLC45A4	Q5BKX6	768 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	CARD16	Q5EG05	197 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	ARSI	Q5FYB1	569 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	EFHC2	Q5JST6	749 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	KCNT1	Q5JUK3	1230 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	PPP1R15B	Q5SWA1	713 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	NEK5	Q6P3R8	708 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	C22orf39	Q6P5X5	142 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	DPY19L3	Q6ZPD9	716 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	ZNF571	Q7Z3V5	609 aa	Predicted RBP	7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	NLRP14	Q86W24	1093 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	TRIM69	Q86WT6	500 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	PLPP6	Q8IY26	295 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	PYROXD2	Q8N2H3	581 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	CHST14	Q8NCH0	376 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	RHBDD1	Q8TEB9	315 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	ARHGEF2	Q92974	986 aa	Known RBP	7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	FAM131C	Q96AQ9	280 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	ISG20	Q96AZ6	181 aa	Known RBP	7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	TBC1D31	Q96DN5	1066 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	MCEE	Q96PE7	176 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	CDC6	Q99741	560 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	HEPH	Q9BQS7	1158 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	CEP44	Q9C0F1	390 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	TNKS2	Q9H2K2	1166 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	HAUS4	Q9H6D7	363 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	CBX8	Q9HC52	389 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	DYRK4	Q9NR20	520 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	NDFIP2	Q9NV92	336 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	TMEM248	Q9NWD8	314 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	TAS2R14	Q9NYV8	317 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	IL36A	Q9UHA7	158 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	PCOLCE2	Q9UKZ9	415 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	FZD10	Q9ULW2	581 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	WASF3	Q9UPY6	502 aa		7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	FNDC3A	Q9Y2H6	1198 aa	Known RBP	7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635	URB1	O60287	2271 aa	Known RBP	7.06	□□□□□ -1.28
SF3B3-209	ENST00000567635		A0A1W2PR77	199 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	TMEM191C	A6NGB0	347 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635		H0Y8X5	98 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	GOLGA6L19	H0YKK7	550 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	TLR4	O00206	839 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	WNT9A	O14904	365 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	FLRT2	O43155	660 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	KDELR3	O43731	214 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	CREB3	O43889	395 aa		7.05	□□□□□ -1.28
SF3B3-209	ENST00000567635	PCDHGA12	O60330	932 aa		7.05	□□□□□ -1.28

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms