RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 EBF4Q9BQW3 602 aa18.04■□□□□ 0.48
CMTM3-214ENST00000567572 CEP41Q9BYV8 373 aa18.04■□□□□ 0.48
CMTM3-214ENST00000567572 RNF208Q9H0X6 261 aa18.04■□□□□ 0.48
CMTM3-214ENST00000567572 TMEM216Q9P0N5 145 aa18.04■□□□□ 0.48
CMTM3-214ENST00000567572 VWA8A3KMH1 1905 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 TET1Q8NFU7 2136 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 F5H423 210 aaPredicted RBP18.03■□□□□ 0.48
CMTM3-214ENST00000567572 FAM72CH0Y354 149 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 ITM2AO43736 263 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 TBX10O75333 385 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 TADA2AO75478 443 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 AMHP03971 560 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 CPOXP36551 454 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 POLD2P49005 469 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 COPAP53621 1224 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 SLC5A3P53794 718 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 IRX4P78413 519 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 KDSRQ06136 332 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 CDH17Q12864 832 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 FSCBQ5H9T9 825 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 VARS2Q5ST30 1063 aaKnown RBP18.03■□□□□ 0.48
CMTM3-214ENST00000567572 FAM72AQ5TYM5 149 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 FAM72DQ6L9T8 149 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 ANKRD33Q7Z3H0 272 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 FAM72BQ86X60 149 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 DCP1BQ8IZD4 617 aaKnown RBP18.03■□□□□ 0.48
CMTM3-214ENST00000567572 DPF3Q92784 378 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 CMTM5Q96DZ9 223 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 TEKT5Q96M29 485 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 TTC3P53804 2025 aa18.03■□□□□ 0.48
CMTM3-214ENST00000567572 SCN5AQ14524 2016 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.02■□□□□ 0.48
CMTM3-214ENST00000567572 ZBTB24O43167 697 aaPredicted RBP18.02■□□□□ 0.48
CMTM3-214ENST00000567572 CACNG3O60359 315 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 SIN3BO75182 1162 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 CXCL10P02778 98 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 GRIK1P39086 918 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 ABL2P42684 1182 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 CPA2P48052 419 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 IDH3AP50213 366 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 AP2B1P63010 937 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 KLC1Q07866 573 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 MPP3Q13368 585 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 LBRQ14739 615 aaKnown RBP18.02■□□□□ 0.48
CMTM3-214ENST00000567572 TMCO4Q5TGY1 634 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 PDPK2PQ6A1A2 396 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 FSTL4Q6MZW2 842 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 TAC4Q86UU9 113 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 MYLK4Q86YV6 388 aaPredicted RBP18.02■□□□□ 0.48
CMTM3-214ENST00000567572 PLCD3Q8N3E9 789 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 FUBP3Q96I24 572 aaKnown RBP eCLIP18.02■□□□□ 0.48
CMTM3-214ENST00000567572 OSBPL2Q9H1P3 480 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 WDCPQ9H6R7 721 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 MARCH5Q9NX47 278 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 SLC7A8Q9UHI5 535 aa18.02■□□□□ 0.48
CMTM3-214ENST00000567572 A6NHS1 94 aa18.02■□□□□ 0.47
CMTM3-214ENST00000567572 ZNF195O14628 629 aa18.02■□□□□ 0.47
CMTM3-214ENST00000567572 MAP3K7O43318 606 aa18.02■□□□□ 0.47
CMTM3-214ENST00000567572 HOXA2O43364 376 aa18.02■□□□□ 0.47
CMTM3-214ENST00000567572 LYPLA1O75608 230 aaPredicted RBP18.02■□□□□ 0.47
CMTM3-214ENST00000567572 IGLV3-25P01717 112 aa18.02■□□□□ 0.47
CMTM3-214ENST00000567572 SRGAP2BP0DMP2 458 aa18.02■□□□□ 0.47
CMTM3-214ENST00000567572 CD68P34810 354 aaPredicted RBP18.02■□□□□ 0.47
CMTM3-214ENST00000567572 CSRP3P50461 194 aa18.02■□□□□ 0.47
CMTM3-214ENST00000567572 MXRA7P84157 204 aa18.02■□□□□ 0.47
CMTM3-214ENST00000567572 MRPL58Q14197 206 aaKnown RBP18.02■□□□□ 0.47
CMTM3-214ENST00000567572 NFE2Q16621 373 aaPredicted RBP18.02■□□□□ 0.47
CMTM3-214ENST00000567572 RIPOR1Q6ZS17 1223 aa18.02■□□□□ 0.47
CMTM3-214ENST00000567572 KCNMB4Q86W47 210 aa18.02■□□□□ 0.47
CMTM3-214ENST00000567572 NPAS4Q8IUM7 802 aa18.02■□□□□ 0.47
CMTM3-214ENST00000567572 NPWQ8N729 165 aa18.02■□□□□ 0.47
CMTM3-214ENST00000567572 DQX1Q8TE96 717 aaKnown RBP18.02■□□□□ 0.47
CMTM3-214ENST00000567572 JADE3Q92613 823 aa18.02■□□□□ 0.47
CMTM3-214ENST00000567572 MLPHQ9BV36 600 aaPredicted RBP18.02■□□□□ 0.47
CMTM3-214ENST00000567572 OSBPL1AQ9BXW6 950 aa18.02■□□□□ 0.47
CMTM3-214ENST00000567572 PIH1D1Q9NWS0 290 aaKnown RBP18.02■□□□□ 0.47
CMTM3-214ENST00000567572 LRFN2Q9ULH4 789 aa18.02■□□□□ 0.47
CMTM3-214ENST00000567572 ZNF638Q14966 1978 aaKnown RBP18.01■□□□□ 0.47
CMTM3-214ENST00000567572 A0A096LPK6 155 aa18.01■□□□□ 0.47
CMTM3-214ENST00000567572 CCNT2O60583 730 aaKnown RBP18.01■□□□□ 0.47
CMTM3-214ENST00000567572 SLC11A1P49279 550 aa18.01■□□□□ 0.47
CMTM3-214ENST00000567572 MNX1P50219 401 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-214ENST00000567572 BTKQ06187 659 aa18.01■□□□□ 0.47
CMTM3-214ENST00000567572 EIF4EBP2Q13542 120 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-214ENST00000567572 UBAP2LQ14157 1087 aaKnown RBP18.01■□□□□ 0.47
CMTM3-214ENST00000567572 UGP2Q16851 508 aa18.01■□□□□ 0.47
CMTM3-214ENST00000567572 ANO7Q6IWH7 933 aa18.01■□□□□ 0.47
CMTM3-214ENST00000567572 PTCD2Q8WV60 388 aaKnown RBP18.01■□□□□ 0.47
CMTM3-214ENST00000567572 FAM136AQ96C01 138 aa18.01■□□□□ 0.47
CMTM3-214ENST00000567572 SCLYQ96I15 445 aa18.01■□□□□ 0.47
CMTM3-214ENST00000567572 THTPAQ9BU02 230 aa18.01■□□□□ 0.47
CMTM3-214ENST00000567572 KIFC1Q9BW19 673 aa18.01■□□□□ 0.47
CMTM3-214ENST00000567572 GPR62Q9BZJ7 368 aa18.01■□□□□ 0.47
CMTM3-214ENST00000567572 HIPK3Q9H422 1215 aa18.01■□□□□ 0.47
CMTM3-214ENST00000567572 ABI2Q9NYB9 513 aaPredicted RBP18.01■□□□□ 0.47
CMTM3-214ENST00000567572 OR12D3Q9UGF7 316 aa18.01■□□□□ 0.47
CMTM3-214ENST00000567572 AAR2Q9Y312 384 aaKnown RBP18.01■□□□□ 0.47
CMTM3-214ENST00000567572 SEC23IPQ9Y6Y8 1000 aaKnown RBP18.01■□□□□ 0.47
CMTM3-214ENST00000567572 ARHGAP42A6NI28 874 aa18■□□□□ 0.47
CMTM3-214ENST00000567572 COL6A2P12110 1019 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms