RNA–Protein interactions for RNA: ENST00000566682.1

SPG7-215, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 756 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-215ENST00000566682 DESI2Q9BSY9 194 aa13.96□□□□□ -0.17
SPG7-215ENST00000566682 CALN1Q9BXU9 219 aa13.96□□□□□ -0.17
SPG7-215ENST00000566682 CEP44Q9C0F1 390 aa13.96□□□□□ -0.17
SPG7-215ENST00000566682 LACRTQ9GZZ8 138 aa13.96□□□□□ -0.17
SPG7-215ENST00000566682 TNKS2Q9H2K2 1166 aa13.96□□□□□ -0.17
SPG7-215ENST00000566682 GOLPH3Q9H4A6 298 aa13.96□□□□□ -0.17
SPG7-215ENST00000566682 KLHL11Q9NVR0 708 aa13.96□□□□□ -0.17
SPG7-215ENST00000566682 WSB2Q9NYS7 404 aaPredicted RBP13.96□□□□□ -0.17
SPG7-215ENST00000566682 RCOR3Q9P2K3 495 aaPredicted RBP13.96□□□□□ -0.17
SPG7-215ENST00000566682 SCML1Q9UN30 329 aa13.96□□□□□ -0.17
SPG7-215ENST00000566682 FCF1Q9Y324 198 aaKnown RBP13.96□□□□□ -0.17
SPG7-215ENST00000566682 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 ZSCAN5CA6NGD5 496 aaPredicted RBP13.95□□□□□ -0.18
SPG7-215ENST00000566682 ARHGAP42A6NI28 874 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 BTNL10A8MVZ5 291 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 J3KR12 359 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 DFFAO00273 331 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 MID1O15344 667 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 SPOPO43791 374 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 IL1BP01584 269 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 IGLV3-19P01714 112 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 TNNT1P13805 278 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 KDELR1P24390 212 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 CD6P30203 668 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 OXTRP30559 389 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 SLC8A1P32418 973 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 RPL6Q02878 288 aaKnown RBP13.95□□□□□ -0.18
SPG7-215ENST00000566682 NUMA1Q14980 2115 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 ANKRD20A8PQ5CZ79 823 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 TMCO3Q6UWJ1 677 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 KIAA1328Q86T90 577 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 FAM124AQ86V42 546 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 LRRC8AQ8IWT6 810 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 TP53INP2Q8IXH6 220 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 RHOT1Q8IXI2 618 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 TMEFF1Q8IYR6 380 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 PCDH20Q8N6Y1 951 aaKnown RBP13.95□□□□□ -0.18
SPG7-215ENST00000566682 TPCN2Q8NHX9 752 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 RAPGEF5Q92565 580 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 ISG20Q96AZ6 181 aaKnown RBP13.95□□□□□ -0.18
SPG7-215ENST00000566682 TOE1Q96GM8 510 aaKnown RBP13.95□□□□□ -0.18
SPG7-215ENST00000566682 CCDC114Q96M63 670 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 ZNF670Q9BS34 389 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 PABPC3Q9H361 631 aaKnown RBP13.95□□□□□ -0.18
SPG7-215ENST00000566682 NCDNQ9UBB6 729 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 SARDHQ9UL12 918 aa13.95□□□□□ -0.18
SPG7-215ENST00000566682 TNRC6BQ9UPQ9 1833 aaKnown RBP13.94□□□□□ -0.18
SPG7-215ENST00000566682 SHROOM3Q8TF72 1996 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 A0A0U1RQJ8 604 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 ALOX15BO15296 676 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 NDUFS2O75306 463 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 RETP07949 1114 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 C5AR1P21730 350 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 RECQLP46063 649 aaPredicted RBP13.94□□□□□ -0.18
SPG7-215ENST00000566682 PSMD8P48556 350 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 DNA2P51530 1060 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 NAP1L1P55209 391 aaKnown RBP13.94□□□□□ -0.18
SPG7-215ENST00000566682 TTC31Q49AM3 519 aaPredicted RBP13.94□□□□□ -0.18
SPG7-215ENST00000566682 INO80DQ53TQ3 878 aaPredicted RBP13.94□□□□□ -0.18
SPG7-215ENST00000566682 CARD16Q5EG05 197 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 LRRC38Q5VT99 294 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 DPY19L3Q6ZPD9 716 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 ARHGAP36Q6ZRI8 547 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 LPCAT2Q7L5N7 544 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 DSG4Q86SJ6 1040 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 DCLK2Q8N568 766 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 DEFB119Q8N690 84 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 CHST14Q8NCH0 376 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 PCDH19Q8TAB3 1148 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 CASKIN2Q8WXE0 1202 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 RUBCNQ92622 972 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 LOXL4Q96JB6 756 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 CALR3Q96L12 384 aaKnown RBP13.94□□□□□ -0.18
SPG7-215ENST00000566682 TM6SF2Q9BZW4 377 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 PDFQ9HBH1 243 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 FBXL12Q9NXK8 326 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 GMEB2Q9UKD1 530 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 PPM1HQ9ULR3 514 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 NCKAP1Q9Y2A7 1128 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 VPS13AQ96RL7 3174 aa13.94□□□□□ -0.18
SPG7-215ENST00000566682 A0A1W2PP55 124 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 LRRD1A4D1F6 860 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 ARHGAP6O43182 974 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 PRAMEF11O60813 436 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 TMCC1O94876 653 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 ADH1BP00325 375 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 CTSLP07711 333 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 CHRNA3P32297 505 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 ACSL1P33121 698 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 SERPINB6P35237 376 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 DHPSP49366 369 aaPredicted RBP13.93□□□□□ -0.18
SPG7-215ENST00000566682 METAP1P53582 386 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 KIF5AQ12840 1032 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 SFSWAPQ12872 951 aaKnown RBP13.93□□□□□ -0.18
SPG7-215ENST00000566682 CYTH1Q15438 398 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 SPDYCQ5MJ68 293 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 NCBP2-AS2Q69YL0 99 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 C11orf63Q6NUN7 778 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 USP30Q70CQ3 517 aa13.93□□□□□ -0.18
SPG7-215ENST00000566682 DAAM2Q86T65 1068 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms