RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 KRT3P12035 628 aa20.61■□□□□ 0.89
CLN6-207ENST00000566347 GLDCP23378 1020 aa20.61■□□□□ 0.89
CLN6-207ENST00000566347 SERPINH1P50454 418 aaKnown RBP20.61■□□□□ 0.89
CLN6-207ENST00000566347 STAT4Q14765 748 aa20.61■□□□□ 0.89
CLN6-207ENST00000566347 CLEC16AQ2KHT3 1053 aa20.61■□□□□ 0.89
CLN6-207ENST00000566347 PRAMEF14Q5SWL7 426 aa20.61■□□□□ 0.89
CLN6-207ENST00000566347 CCDC183Q5T5S1 534 aa20.61■□□□□ 0.89
CLN6-207ENST00000566347 PHLDB2Q86SQ0 1253 aa20.61■□□□□ 0.89
CLN6-207ENST00000566347 DRC7Q8IY82 874 aa20.61■□□□□ 0.89
CLN6-207ENST00000566347 OSBPL2Q9H1P3 480 aa20.61■□□□□ 0.89
CLN6-207ENST00000566347 IL36AQ9UHA7 158 aa20.61■□□□□ 0.89
CLN6-207ENST00000566347 PTPRBP23467 1997 aa20.61■□□□□ 0.89
CLN6-207ENST00000566347 COL5A1P20908 1838 aaPredicted RBP20.6■□□□□ 0.89
CLN6-207ENST00000566347 GOLGA8CPA6NN73 597 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 ZMPSTE24O75844 475 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 RXRGP48443 463 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 MAPKAPK2P49137 400 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 TAS2R38P59533 333 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 PTP4A2Q12974 167 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 SHBQ15464 509 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 MANEALQ5VSG8 457 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 TMPRSS7Q7RTY8 843 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 PHF13Q86YI8 300 aaPredicted RBP20.6■□□□□ 0.89
CLN6-207ENST00000566347 GATAD2AQ86YP4 633 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 GALNT15Q8N3T1 639 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 PCDH20Q8N6Y1 951 aaKnown RBP20.6■□□□□ 0.89
CLN6-207ENST00000566347 CHST14Q8NCH0 376 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 JOSD2Q8TAC2 188 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 SAP25Q8TEE9 199 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 CENPIQ92674 756 aaPredicted RBP20.6■□□□□ 0.89
CLN6-207ENST00000566347 PCDHB18PQ96TA0 734 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 SELENOOQ9BVL4 669 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 HDAC8Q9BY41 377 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 TNKS2Q9H2K2 1166 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 DMXL2Q8TDJ6 3036 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 WDFY3Q8IZQ1 3526 aa20.6■□□□□ 0.89
CLN6-207ENST00000566347 SRRM3A6NNA2 597 aaPredicted RBP20.59■□□□□ 0.89
CLN6-207ENST00000566347 CCDC172P0C7W6 258 aa20.59■□□□□ 0.89
CLN6-207ENST00000566347 RHOQP17081 205 aa20.59■□□□□ 0.89
CLN6-207ENST00000566347 EPHA8P29322 1005 aaPredicted RBP20.59■□□□□ 0.89
CLN6-207ENST00000566347 GEMIN4P57678 1058 aaKnown RBP20.59■□□□□ 0.89
CLN6-207ENST00000566347 RAB6CQ53S08 254 aa20.59■□□□□ 0.89
CLN6-207ENST00000566347 ARSIQ5FYB1 569 aa20.59■□□□□ 0.89
CLN6-207ENST00000566347 RWDD4Q6NW29 188 aaKnown RBP20.59■□□□□ 0.89
CLN6-207ENST00000566347 DPY19L3Q6ZPD9 716 aa20.59■□□□□ 0.89
CLN6-207ENST00000566347 ERN2Q76MJ5 926 aaKnown RBP20.59■□□□□ 0.89
CLN6-207ENST00000566347 C3orf20Q8ND61 904 aa20.59■□□□□ 0.89
CLN6-207ENST00000566347 GRIN3AQ8TCU5 1115 aa20.59■□□□□ 0.89
CLN6-207ENST00000566347 FAM172AQ8WUF8 416 aa20.59■□□□□ 0.89
CLN6-207ENST00000566347 ARRDC3Q96B67 414 aa20.59■□□□□ 0.89
CLN6-207ENST00000566347 RAB6CQ9H0N0 254 aa20.59■□□□□ 0.89
CLN6-207ENST00000566347 SEPT11Q9NVA2 429 aaKnown RBP20.59■□□□□ 0.89
CLN6-207ENST00000566347 PLXNB3Q9ULL4 1909 aa20.59■□□□□ 0.89
CLN6-207ENST00000566347 DOCK9Q9BZ29 2069 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 FREM2Q5SZK8 3169 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 A0A1W2PQU0 124 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 ZNF821O75541 412 aaPredicted RBP20.58■□□□□ 0.89
CLN6-207ENST00000566347 LEFTY1O75610 366 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 GJB6O95452 261 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 GPD1P21695 349 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 RFC1P35251 1148 aaPredicted RBP20.58■□□□□ 0.89
CLN6-207ENST00000566347 HDAC4P56524 1084 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 ARF5P84085 180 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 C1QBPQ07021 282 aaKnown RBP20.58■□□□□ 0.89
CLN6-207ENST00000566347 SCAPQ12770 1279 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 NCAPHQ15003 741 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 NLRP14Q86W24 1093 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 HORMAD1Q86X24 394 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 NTAN1Q96AB6 310 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 TBC1D31Q96DN5 1066 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 AGPAT1Q99943 283 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 NAT10Q9H0A0 1025 aaKnown RBP20.58■□□□□ 0.89
CLN6-207ENST00000566347 TMEM248Q9NWD8 314 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 WASF2Q9Y6W5 498 aa20.58■□□□□ 0.89
CLN6-207ENST00000566347 CHD5Q8TDI0 1954 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 ANKRD11Q6UB99 2663 aaPredicted RBP20.57■□□□□ 0.88
CLN6-207ENST00000566347 ZFHX4Q86UP3 3567 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 ANKRD62A6NC57 917 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 SIGLEC16A6NMB1 481 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 LRIG2O94898 1065 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 PLEKP08567 350 aaPredicted RBP20.57■□□□□ 0.88
CLN6-207ENST00000566347 ITGB7P26010 798 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 DNA2P51530 1060 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 CARD16Q5EG05 197 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 MON1BQ7L1V2 547 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 APTXQ7Z2E3 356 aaKnown RBP20.57■□□□□ 0.88
CLN6-207ENST00000566347 PKD1L2Q7Z442 2459 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 SPATS2Q86XZ4 545 aaKnown RBP20.57■□□□□ 0.88
CLN6-207ENST00000566347 PLPP6Q8IY26 295 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 TMEM145Q8NBT3 493 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 ISG20Q96AZ6 181 aaKnown RBP20.57■□□□□ 0.88
CLN6-207ENST00000566347 KLHDC7BQ96G42 594 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 CNDP2Q96KP4 475 aaKnown RBP20.57■□□□□ 0.88
CLN6-207ENST00000566347 HEPHQ9BQS7 1158 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 MAGEH1Q9H213 219 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 HPCAL4Q9UM19 191 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 PCDHGA1Q9Y5H4 931 aa20.57■□□□□ 0.88
CLN6-207ENST00000566347 FAM208BQ5VWN6 2430 aa20.56■□□□□ 0.88
CLN6-207ENST00000566347 ENC1O14682 589 aa20.56■□□□□ 0.88
CLN6-207ENST00000566347 SLC31A1O15431 190 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms