RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 CFC1P0CG37 223 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 CDKN1AP38936 164 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 NOVP48745 357 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 CLCNKBP51801 687 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 PMP22Q01453 160 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 GRM4Q14833 912 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 XKR9Q5GH70 373 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 RHBDF2Q6PJF5 856 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 SERPINA11Q86U17 422 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 NRSN1Q8IZ57 195 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 IL17RCQ8NAC3 791 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 NEXN-AS1Q8NBZ9 246 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 LRRC8CQ8TDW0 803 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 HDAC7Q8WUI4 952 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 MTBPQ96DY7 904 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 MCRS1Q96EZ8 462 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 FRG2BQ96QU4 278 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 GDF15Q99988 308 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 IFT27Q9BW83 186 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 XRN2Q9H0D6 950 aaKnown RBP eCLIP2.45□□□□□ -2.02
SMG1-212ENST00000566328 SCRT2Q9NQ03 307 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 TCEAL9Q9UHQ7 104 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 SLC25A13Q9UJS0 675 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 THRAP3Q9Y2W1 955 aaKnown RBP2.45□□□□□ -2.02
SMG1-212ENST00000566328 ADAM18Q9Y3Q7 739 aa2.45□□□□□ -2.02
SMG1-212ENST00000566328 MST1RQ04912 1400 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 IGHV4OR15-8A0A075B7B6 117 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 IGKV3D-15A0A087WSY6 115 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 A0A1B0GU03 582 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 DYTNA2CJ06 578 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 ANKRD62A6NC57 917 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 P2RY10O00398 339 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 HNRNPDLO14979 420 aaKnown RBP2.44□□□□□ -2.02
SMG1-212ENST00000566328 FGF17O60258 216 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 RPP40O75818 363 aaKnown RBP2.44□□□□□ -2.02
SMG1-212ENST00000566328 CH25HO95992 272 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 ATP1A1P05023 1023 aaKnown RBP2.44□□□□□ -2.02
SMG1-212ENST00000566328 PEPDP12955 493 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 PCP4P48539 62 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 CASP5P51878 434 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 ALDH18A1P54886 795 aaKnown RBP2.44□□□□□ -2.02
SMG1-212ENST00000566328 ADORA2A-AS1P86434 159 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 RNASELQ05823 741 aaKnown RBP2.44□□□□□ -2.02
SMG1-212ENST00000566328 PKP1Q13835 747 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 MYBPC2Q14324 1141 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 SLC1A5Q15758 541 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 CALCRLQ16602 461 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 TMEM268Q5VZI3 342 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 RINT1Q6NUQ1 792 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 FOXL2NBQ6ZUU3 175 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 TMC8Q8IU68 726 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 KLHDC8BQ8IXV7 354 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 RBFAQ8N0V3 343 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 MYO1HQ8N1T3 1032 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 FAR1Q8WVX9 515 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 TMEM18Q96B42 140 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 OR1F2PQ96R84 312 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 NPAS1Q99742 590 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 MMTAG2Q9BU76 263 aaKnown RBP2.44□□□□□ -2.02
SMG1-212ENST00000566328 DDX23Q9BUQ8 820 aaKnown RBP2.44□□□□□ -2.02
SMG1-212ENST00000566328 GFRA4Q9GZZ7 299 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 Q9N2J8 555 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 STARD7Q9NQZ5 370 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 PAM16Q9Y3D7 125 aa2.44□□□□□ -2.02
SMG1-212ENST00000566328 RASA4BC9J798 803 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 GAGE7O76087 117 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 GAGE12FP0CL80 117 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 GAGE12GP0CL81 117 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 GAGE12IP0CL82 117 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 GSTM2P28161 218 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 RPL3P39023 403 aaKnown RBP2.43□□□□□ -2.02
SMG1-212ENST00000566328 ECT2LQ008S8 904 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 GAGE1Q13065 139 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 GAGE4Q13068 117 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 IFIT5Q13325 482 aaKnown RBP2.43□□□□□ -2.02
SMG1-212ENST00000566328 CTTNQ14247 550 aaKnown RBP2.43□□□□□ -2.02
SMG1-212ENST00000566328 SYTL3Q4VX76 610 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 PLA2G4FQ68DD2 849 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 KLHL24Q6TFL4 600 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 MARK2Q7KZI7 788 aaKnown RBP2.43□□□□□ -2.02
SMG1-212ENST00000566328 PGBD5Q8N414 524 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 CLEC4CQ8WTT0 213 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 USP13Q92995 863 aaPredicted RBP2.43□□□□□ -2.02
SMG1-212ENST00000566328 TRIM31Q9BZY9 425 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 TM7SF3Q9NS93 570 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 OBP2AQ9NY56 170 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 OSGIN2Q9Y236 505 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 CEP83Q9Y592 693 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 SMAD5-AS1Q9Y6J3 95 aa2.43□□□□□ -2.02
SMG1-212ENST00000566328 KIF28PB7ZC32 967 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 PCDH17O14917 1159 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 CLDN7O95471 211 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 AFPP02771 609 aaKnown RBP2.42□□□□□ -2.02
SMG1-212ENST00000566328 DHRS4L1P0CG22 281 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 ZNF883P0CG24 379 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 FCGR2AP12318 317 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 CKMT1AP12532 417 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 KCNA5P22460 613 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 HOXC13P31276 330 aa2.42□□□□□ -2.02
SMG1-212ENST00000566328 FMO4P31512 558 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms