RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 FAM199XQ6PEV8 388 aaPredicted RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 UNC5AQ6ZN44 842 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 C10orf107Q8IVU9 208 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 RAVER1Q8IY67 606 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 OR6P1Q8NGX9 317 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 OR8K3Q8NH51 312 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 DHX38Q92620 1227 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 AIFM2Q9BRQ8 373 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 COPS7BQ9H9Q2 264 aaPredicted RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 GMIPQ9P107 970 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 MAP10Q9P2G4 905 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ENPP3O14638 875 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 CLPXO76031 633 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 TMEM63AO94886 807 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PLATP00750 562 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 BMP4P12644 408 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 NR2F2P24468 414 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PRKAR1BP31321 381 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 NME5P56597 212 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 TAS2R40P59535 323 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 YWHAZP63104 245 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 FMO1Q01740 532 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 DUSP7Q16829 419 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ETFRF1Q6IPR1 90 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 NSMFQ6X4W1 530 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 FRA10AC1Q70Z53 315 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ERMP1Q7Z2K6 904 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 TFAP2DQ7Z6R9 452 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 TOP1MTQ969P6 601 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 GDF15Q99988 308 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 CAB39LQ9H9S4 337 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 RAD18Q9NS91 495 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ATP6V1HQ9UI12 483 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 TIAM2Q8IVF5 1701 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 I3L4J1 428 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 GNB5O14775 395 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 EXTL3O43909 919 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 OGNP20774 298 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 ZNF132P52740 706 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 CACNB3P54284 484 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 KDSRQ06136 332 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 BMPR2Q13873 1038 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 COTL1Q14019 142 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 RNF151Q2KHN1 245 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 KRT28Q7Z3Y7 464 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ADGRA1Q86SQ6 560 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 EID3Q8N140 333 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 E2F7Q96AV8 911 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 C2orf49Q9BVC5 232 aaPredicted RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 PRDM5Q9NQX1 630 aaPredicted RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 XPO7Q9UIA9 1087 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 PRPF19Q9UMS4 504 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 AP4S1Q9Y587 144 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PPP2R3BQ9Y5P8 575 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 FAM149AA5PLN7 773 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 CALB1P05937 261 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PSMC3P17980 439 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 TNNI3P19429 210 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 SERPINB1P30740 379 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 SLC26A2P50443 739 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 CASP5P51878 434 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 TMBIM6P55061 237 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ZNF45Q02386 682 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 NFE2Q16621 373 aaPredicted RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 CDONQ4KMG0 1287 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 TRIM72Q6ZMU5 477 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 SIMC1Q8NDZ2 872 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 SHC3Q92529 594 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 STN1Q9H668 368 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 BRD7Q9NPI1 651 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 STARD7Q9NQZ5 370 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 SH3D21A4FU49 640 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 C9IYK1 514 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 CCRL2O00421 344 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 SLC12A2P55011 1212 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 GJA9P57773 515 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 KLF1Q13351 362 aaPredicted RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 XKR9Q5GH70 373 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 DBX2Q6ZNG2 339 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 TPH2Q8IWU9 490 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ZNF384Q8TF68 577 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 MARCH7Q9H992 704 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PTPRHQ9HD43 1115 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PCDHA12Q9UN75 941 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ANKRD6Q9Y2G4 727 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 TRAF6Q9Y4K3 522 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 UBR1Q8IWV7 1749 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 PRR23AA6NEV1 266 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 PSMD11O00231 422 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 COPEO14579 308 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 PLIN3O60664 434 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 BCAS1O75363 584 aaPredicted RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 BANF1O75531 89 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 ALDH1A2O94788 518 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 SERPINE1P05121 402 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 MYL4P12829 197 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 CYP7A1P22680 504 aa2.95□□□□□ -1.94
CHD9-218ENST00000566029 ACAT1P24752 427 aaKnown RBP2.95□□□□□ -1.94
CHD9-218ENST00000566029 EIF2DP41214 584 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms