RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 CNTN1Q12860 1018 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 HLA-BQ31612 363 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 TDRD12Q587J7 1177 aaKnown RBP13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 EFHC2Q5JST6 749 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 ARTNQ5T4W7 220 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 ACBD5Q5T8D3 534 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 PPP1R2P3Q6NXS1 205 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 RYBPQ8N488 228 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 C1orf216Q8TAB5 229 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 SETD7Q8WTS6 366 aaKnown RBP13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 CENPIQ92674 756 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 CCDC114Q96M63 670 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 OSBPL2Q9H1P3 480 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 EBF2Q9HAK2 575 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 DNAAF2Q9NVR5 837 aaKnown RBP13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 GPATCH2LQ9NWQ4 482 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 MYO1AQ9UBC5 1043 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 PPARGC1AQ9UBK2 798 aaKnown RBP13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 ZNF212Q9UDV6 495 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 ADAMTS1Q9UHI8 967 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 HS3ST2Q9Y278 367 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 FNDC3AQ9Y2H6 1198 aaKnown RBP13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 FCF1Q9Y324 198 aaKnown RBP13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 TCRBV5S1A1TA0A578 114 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 RNF103O00237 685 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 MCF2LO15068 1137 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 CTSLP07711 333 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 C7P10643 843 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 RHOQP17081 205 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 PMLP29590 882 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 ZNF143P52747 638 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 C21orf59P57076 290 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 FAM193AP78312 1265 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 ARF5P84085 180 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 TBX2Q13207 712 aaPredicted RBP13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 ARSIQ5FYB1 569 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 KCNT1Q5JUK3 1230 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 PRAMEF14Q5SWL7 426 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 MANEALQ5VSG8 457 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 RETSATQ6NUM9 610 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 TMC6Q7Z403 805 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 PIP4P1Q86T03 277 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 NETO2Q8NC67 525 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 OR8K1Q8NGG5 319 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 OR2A12Q8NGT7 310 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 KLK6Q92876 244 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 ARRDC3Q96B67 414 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 ZNF653Q96CK0 615 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 MRFAP1L1Q96HT8 127 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 VCPIP1Q96JH7 1222 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 DNAJC7Q99615 494 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 MYOCQ99972 504 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 ORAI3Q9BRQ5 295 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 CNPY3Q9BT09 278 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 TM6SF2Q9BZW4 377 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 ZDHHC5Q9C0B5 715 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 DYRK4Q9NR20 520 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 TM7SF3Q9NS93 570 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 ARHGAP20Q9P2F6 1191 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 CNOT8Q9UFF9 292 aaKnown RBP13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 ANGPTL2Q9UKU9 493 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 PPM1HQ9ULR3 514 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 ANKRD6Q9Y2G4 727 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 PCDHB9Q9Y5E1 797 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 CHD5Q8TDI0 1954 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 LAMA1P25391 3075 aa13.92□□□□□ -0.18
VPS9D1-204ENST00000565023 A0A1W2PPC4 97 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 WNT9AO14904 365 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 ALOX15BO15296 676 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 GJB3O75712 270 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 ZMPSTE24O75844 475 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 FTLP02792 175 aaPredicted RBP13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 DESP17661 470 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 EPHB2P29323 1055 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 GRIA4P48058 902 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 VASPP50552 380 aaPredicted RBP13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 ZNF75DP51815 510 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 PPP1R15BQ5SWA1 713 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 IL27RAQ6UWB1 636 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 DPY19L3Q6ZPD9 716 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 NLRP14Q86W24 1093 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 NAXDQ8IW45 347 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 OR6K2Q8NGY2 324 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 ARHGEF2Q92974 986 aaKnown RBP13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 NTAN1Q96AB6 310 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 SERAC1Q96JX3 654 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 TRIM7Q9C029 511 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 TMEM248Q9NWD8 314 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 IL36AQ9UHA7 158 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 PCSK1NQ9UHG2 260 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 FZD10Q9ULW2 581 aa13.91□□□□□ -0.18
VPS9D1-204ENST00000565023 H0Y8X5 98 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 RAMP2O60895 175 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 MFAP3LO75121 409 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 WNT1P04628 370 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 TPM1P09493 284 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 GKP32189 559 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 MAPKAPK2P49137 400 aa13.9□□□□□ -0.18
VPS9D1-204ENST00000565023 SERPINH1P50454 418 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms