RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 CCDC15Q0P6D6 951 aa18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 COL9A2Q14055 689 aaPredicted RBP18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 TSR1Q2NL82 804 aaKnown RBP18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 POM121L1PQ3SYA9 428 aa18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 TBC1D3GQ6DHY5 549 aa18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 TBC1D3CQ6IPX1 549 aa18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 TBC1D3Q8IZP1 549 aaPredicted RBP18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 MINDY1Q8N5J2 469 aa18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 PCDH20Q8N6Y1 951 aaKnown RBP18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 TMIEQ8NEW7 156 aa18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 TRIM7Q9C029 511 aa18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 CEP44Q9C0F1 390 aa18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 DHX35Q9H5Z1 703 aaKnown RBP18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 DYRK4Q9NR20 520 aa18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 GPATCH2LQ9NWQ4 482 aa18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 DONSONQ9NYP3 566 aa18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 IL36AQ9UHA7 158 aa18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 CHD6Q8TD26 2715 aa18.73■□□□□ 0.59
SYNGR3-204ENST00000564642 EIF3CLB5ME19 914 aaKnown RBP18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 PLK4O00444 970 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 FGF10O15520 208 aaPredicted RBP18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 SLC7A4O43246 635 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 KDELR3O43731 214 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 PRNPP04156 253 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 MIPP30301 263 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 AFF3P51826 1226 aaKnown RBP18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 METAP1P53582 386 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 ADPRHP54922 357 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 YBEYP58557 167 aaPredicted RBP18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 ACAP1Q15027 740 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 TEAD4Q15561 434 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 CCDC122Q5T0U0 273 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 ALKBH5Q6P6C2 394 aaKnown RBP18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 ARFGAP1Q8N6T3 406 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 OR8K1Q8NGG5 319 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 C1orf216Q8TAB5 229 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 EIF3CQ99613 913 aaKnown RBP18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 THAP2Q9H0W7 228 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 KDM4CQ9H3R0 1056 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 ZNHIT6Q9NWK9 470 aaKnown RBP18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 ARHGAP20Q9P2F6 1191 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 FCF1Q9Y324 198 aaKnown RBP18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 CFAP47Q6ZTR5 3102 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 ATRXP46100 2492 aa18.72■□□□□ 0.59
SYNGR3-204ENST00000564642 A0A1W2PPC4 97 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 WASH4PA8MWX3 477 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 EEF2KO00418 725 aaKnown RBP18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 KPNA3O00505 521 aaPredicted RBP18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 DAPK3O43293 454 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 IGHV4-34P06331 123 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 CTSLP07711 333 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 HNRNPH3P31942 346 aaKnown RBP18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 CSNK1EP49674 416 aaKnown RBP18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 CCR5P51681 352 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 CNTN1Q12860 1018 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 GRIK2Q13002 908 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 SEMA3BQ13214 749 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 CARD16Q5EG05 197 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 ARSIQ5FYB1 569 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 DPY19L3Q6ZPD9 716 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 CHST14Q8NCH0 376 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 OR2I1PQ8NGU4 316 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 SNRNP25Q9BV90 132 aaKnown RBP18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 TM9SF3Q9HD45 589 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 OSGEPQ9NPF4 335 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 TPX2Q9ULW0 747 aaKnown RBP18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 ACTL7AQ9Y615 435 aa18.71■□□□□ 0.59
SYNGR3-204ENST00000564642 A0A1B0GVT2 93 aa18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 ZSCAN5CA6NGD5 496 aaPredicted RBP18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 PLRG1O43660 514 aaKnown RBP18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 BUB1O43683 1085 aa18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 PLXNA2O75051 1894 aa18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 LRCH4O75427 683 aa18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 KCNK5O95279 499 aa18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 CD160O95971 181 aa18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 EIF4A3P38919 411 aaKnown RBP18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 PIGHQ14442 188 aaPredicted RBP18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 IL27RAQ6UWB1 636 aa18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 ADAT2Q7Z6V5 191 aaKnown RBP18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 PSTKQ8IV42 348 aaKnown RBP18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 VSTM4Q8IW00 320 aa18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 RYBPQ8N488 228 aaPredicted RBP18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 ISG20Q96AZ6 181 aaKnown RBP18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 PPP1R16AQ96I34 528 aa18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 PEBP4Q96S96 227 aa18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 HEPHQ9BQS7 1158 aa18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 DEF6Q9H4E7 631 aa18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 DNAAF2Q9NVR5 837 aaKnown RBP18.7■□□□□ 0.58
SYNGR3-204ENST00000564642 RASA4BC9J798 803 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 RASA4O43374 803 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 ZNF821O75541 412 aaPredicted RBP18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 LEFTY1O75610 366 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 PCK1P35558 622 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 GRIA4P48058 902 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 NOVA1P51513 510 aaKnown RBP18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 CCNHP51946 323 aaPredicted RBP18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 CA9Q16790 459 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 PARP15Q460N3 678 aa18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 PPP6R3Q5H9R7 873 aaPredicted RBP18.69■□□□□ 0.58
SYNGR3-204ENST00000564642 AGBL4Q5VU57 503 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms