RNA–Protein interactions for RNA: ENST00000564106.1

UBFD1-203, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-203ENST00000564106 GALK1P51570 392 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 GDF10P55107 478 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 ARL4CP56559 192 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 SARNPP82979 210 aaKnown RBP9.96□□□□□ -0.82
UBFD1-203ENST00000564106 PPIDQ08752 370 aaKnown RBP9.96□□□□□ -0.82
UBFD1-203ENST00000564106 GALNT2Q10471 571 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 CCDC6Q16204 474 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 HIF1AQ16665 826 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 RSPO4Q2I0M5 234 aaPredicted RBP9.96□□□□□ -0.82
UBFD1-203ENST00000564106 EML3Q32P44 896 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 ITPRIPL2Q3MIP1 535 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 TMEM196Q5HYL7 178 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 FAM72AQ5TYM5 149 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 ITPRIPL1Q6GPH6 555 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 FAM72DQ6L9T8 149 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 TIGD7Q6NT04 549 aaPredicted RBP9.96□□□□□ -0.82
UBFD1-203ENST00000564106 RWDD4Q6NW29 188 aaKnown RBP9.96□□□□□ -0.82
UBFD1-203ENST00000564106 ZC3H14Q6PJT7 736 aaKnown RBP9.96□□□□□ -0.82
UBFD1-203ENST00000564106 MAMSTRQ6ZN01 415 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 ARHGEF18Q6ZSZ5 1173 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 CCDC25Q86WR0 208 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 C12orf40Q86WS4 652 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 RALGPS2Q86X27 583 aaPredicted RBP9.96□□□□□ -0.82
UBFD1-203ENST00000564106 FAM72BQ86X60 149 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 MIB1Q86YT6 1006 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 PDIK1LQ8N165 341 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 SPEM1Q8N4L4 309 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 TSEN2Q8NCE0 465 aaKnown RBP9.96□□□□□ -0.82
UBFD1-203ENST00000564106 CCNYQ8ND76 341 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 SH3RF2Q8TEC5 729 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 EXOC4Q96A65 974 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 AZIN2Q96A70 460 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 E2F7Q96AV8 911 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 ZFRQ96KR1 1074 aaKnown RBP9.96□□□□□ -0.82
UBFD1-203ENST00000564106 GCNAQ96QF7 691 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 RBM15Q96T37 977 aaKnown RBP eCLIP9.96□□□□□ -0.82
UBFD1-203ENST00000564106 DDX50Q9BQ39 737 aaKnown RBP9.96□□□□□ -0.82
UBFD1-203ENST00000564106 ZYG11BQ9C0D3 744 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 SIK2Q9H0K1 926 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 SEMA4AQ9H3S1 761 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 C8orf33Q9H7E9 229 aaPredicted RBP9.96□□□□□ -0.82
UBFD1-203ENST00000564106 USP29Q9HBJ7 922 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 HAUS2Q9NVX0 235 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 TRHDEQ9UKU6 1024 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 PLAAQ9Y263 795 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 FARP1Q9Y4F1 1045 aaPredicted RBP9.96□□□□□ -0.82
UBFD1-203ENST00000564106 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.96□□□□□ -0.82
UBFD1-203ENST00000564106 LAMA1P25391 3075 aa9.96□□□□□ -0.82
UBFD1-203ENST00000564106 SHROOM3Q8TF72 1996 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 A0A0A0MRY4 1105 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 GOLGA6CA6NDK9 693 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 ZNF840PA6NDX5 716 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 WASH4PA8MWX3 477 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 E7EVH7 732 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 I6L893 689 aaPredicted RBP9.95□□□□□ -0.82
UBFD1-203ENST00000564106 TP73O15350 636 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 GDF9O60383 454 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 RNF40O75150 1001 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 PAPSS2O95340 614 aaPredicted RBP9.95□□□□□ -0.82
UBFD1-203ENST00000564106 LATS1O95835 1130 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 MOCS2O96007 188 aaPredicted RBP9.95□□□□□ -0.82
UBFD1-203ENST00000564106 IVLP07476 585 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 MYZAPP0CAP1 466 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 ZSCAN5DPP0CG00 497 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 GOLGA6DP0CG33 693 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 TSHRP16473 764 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 RHOQP17081 205 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 TPSB2P20231 275 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 PHBP35232 272 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 AVPR1AP37288 418 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 OPRD1P41143 372 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 GARSP41250 739 aaKnown RBP9.95□□□□□ -0.82
UBFD1-203ENST00000564106 MAGEA6P43360 314 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 CXCL12P48061 93 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 CCR3P51677 355 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 NDST2P52849 883 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 FAM193AP78312 1265 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 SPEM2Q0P670 501 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 AP1B1Q10567 949 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 SLC10A2Q12908 348 aaPredicted RBP9.95□□□□□ -0.82
UBFD1-203ENST00000564106 TPSAB1Q15661 275 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 ANO4Q32M45 955 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 CNPY4Q8N129 248 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 ATPAF2Q8N5M1 289 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 RTL3Q8N8U3 475 aaKnown RBP9.95□□□□□ -0.82
UBFD1-203ENST00000564106 NAT8LQ8N9F0 302 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 GLIS1Q8NBF1 620 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 CPT1BQ92523 772 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 MRPS31Q92665 395 aaKnown RBP9.95□□□□□ -0.82
UBFD1-203ENST00000564106 PRCCQ92733 491 aaPredicted RBP9.95□□□□□ -0.82
UBFD1-203ENST00000564106 SPATA13Q96N96 652 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 ZIM3Q96PE6 472 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 SH3GL2Q99962 352 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 CCDC77Q9BR77 488 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 STMN4Q9H169 189 aaPredicted RBP9.95□□□□□ -0.82
UBFD1-203ENST00000564106 CDC42EP4Q9H3Q1 356 aaKnown RBP9.95□□□□□ -0.82
UBFD1-203ENST00000564106 SMOC1Q9H4F8 434 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 CCSER2Q9H7U1 834 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 ECT2Q9H8V3 914 aa9.95□□□□□ -0.82
UBFD1-203ENST00000564106 PPCSQ9HAB8 311 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms