RNA–Protein interactions for RNA: ENST00000563404.1

HDGFL3-203, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-203ENST00000563404 PIAS2O75928 621 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 ENDOD1O94919 500 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 MT-CO3P00414 261 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 PRB1P04280 392 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 MYF5P13349 255 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 HNRNPA2B1P22626 353 aaKnown RBP17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 CDH5P33151 784 aaPredicted RBP17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 FLT3P36888 993 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 GABRB2P47870 512 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 DEUP1Q05D60 604 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 FGL2Q14314 439 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 TMEM259Q4ZIN3 620 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 C2CD6Q53TS8 623 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 SMYD5Q6GMV2 418 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 ERN2Q76MJ5 926 aaKnown RBP17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 BNIPLQ7Z465 357 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 XYLT1Q86Y38 959 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 C1orf74Q96LT6 269 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 UBL7Q96S82 380 aaPredicted RBP17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 CALN1Q9BXU9 219 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 HDAC8Q9BY41 377 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 IL36AQ9UHA7 158 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 STAP1Q9ULZ2 295 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 FARP1Q9Y4F1 1045 aaPredicted RBP17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 PCDHB1Q9Y5F3 818 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 ACTL7AQ9Y615 435 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 WASF2Q9Y6W5 498 aa17.17■□□□□ 0.34
HDGFL3-203ENST00000563404 LY6G6EA0A0G2JKS1 128 aa17.16■□□□□ 0.34
HDGFL3-203ENST00000563404 PRNPP04156 253 aa17.16■□□□□ 0.34
HDGFL3-203ENST00000563404 AKT2P31751 481 aa17.16■□□□□ 0.34
HDGFL3-203ENST00000563404 CLCN6P51797 869 aa17.16■□□□□ 0.34
HDGFL3-203ENST00000563404 SNX16P57768 344 aa17.16■□□□□ 0.34
HDGFL3-203ENST00000563404 SLC25A52Q3SY17 297 aa17.16■□□□□ 0.34
HDGFL3-203ENST00000563404 MIIPQ5JXC2 388 aa17.16■□□□□ 0.34
HDGFL3-203ENST00000563404 KDM7AQ6ZMT4 941 aa17.16■□□□□ 0.34
HDGFL3-203ENST00000563404 TMC6Q7Z403 805 aa17.16■□□□□ 0.34
HDGFL3-203ENST00000563404 ABI3BPQ7Z7G0 1075 aa17.16■□□□□ 0.34
HDGFL3-203ENST00000563404 ERICH1Q86X53 443 aa17.16■□□□□ 0.34
HDGFL3-203ENST00000563404 TMEM35BQ8NCS4 154 aa17.16■□□□□ 0.34
HDGFL3-203ENST00000563404 BMFQ96LC9 184 aa17.16■□□□□ 0.34
HDGFL3-203ENST00000563404 CCDC114Q96M63 670 aa17.16■□□□□ 0.34
HDGFL3-203ENST00000563404 GPR27Q9NS67 375 aa17.16■□□□□ 0.34
HDGFL3-203ENST00000563404 U3KQA8 63 aa17.16■□□□□ 0.34
HDGFL3-203ENST00000563404 PTPRQQ9UMZ3 2332 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 RAD51BO15315 384 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 SRGAP2O75044 1071 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 C1QL1O75973 258 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 PCDH8O95206 1070 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 CD160O95971 181 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 F9P00740 461 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 CKMT1AP12532 417 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 CYP11B1P15538 503 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 OR1E1P30953 314 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 SCNN1AP37088 669 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 ARF5P84085 180 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 DAB2P98082 770 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 E2F1Q01094 437 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 DRAP1Q14919 205 aaPredicted RBP17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 MAN2A1Q16706 1144 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 RAB6CQ53S08 254 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 ZNF542PQ5EBM4 170 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 FAM102AQ5T9C2 384 aaPredicted RBP17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 TAF3Q5VWG9 929 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 CDCP2Q5VXM1 449 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 LRRC31Q6UY01 552 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 LRRC69Q6ZNQ3 347 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 Q6ZSR6 202 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 FGF11Q92914 225 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 C18orf8Q96DM3 657 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 SPON2Q9BUD6 331 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 RAB6CQ9H0N0 254 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 DYRK4Q9NR20 520 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 TMEM59LQ9UK28 342 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 FHOD1Q9Y613 1164 aa17.15■□□□□ 0.34
HDGFL3-203ENST00000563404 TDRD6O60522 2096 aaKnown RBP17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 ILVBLA1L0T0 632 aa17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 POM121BA6NF01 834 aa17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 EIF4E1BA6NMX2 242 aaKnown RBP17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 RRP8O43159 456 aaKnown RBP17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 SERPINH1P50454 418 aaKnown RBP17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 TBC1D25Q3MII6 688 aa17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 VWA3BQ502W6 1294 aa17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 NOP9Q86U38 636 aaKnown RBP17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 VOPP1Q96AW1 172 aa17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 APOLD1Q96LR9 279 aa17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 CFAP57Q96MR6 1250 aa17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 HAPLN3Q96S86 360 aa17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 NAA15Q9BXJ9 866 aaKnown RBP17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 SLC17A9Q9BYT1 436 aa17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 NDST4Q9H3R1 872 aa17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 FADS3Q9Y5Q0 445 aa17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 DOCK4Q8N1I0 1966 aa17.14■□□□□ 0.33
HDGFL3-203ENST00000563404 MGAQ8IWI9 3026 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 SHROOM3Q8TF72 1996 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 GOLGA8SH3BPF8 625 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 OPA1O60313 960 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 NEBLO76041 1014 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 PAK4O96013 591 aaPredicted RBP17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 ADRB3P13945 408 aa17.13■□□□□ 0.33
HDGFL3-203ENST00000563404 NEK3P51956 506 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms