RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 DPCR1Q3MIW9 517 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ARSIQ5FYB1 569 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 TAF3Q5VWG9 929 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 LRRC31Q6UY01 552 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 GCNT7Q6ZNI0 430 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ERN2Q76MJ5 926 aaKnown RBP17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 HORMAD1Q86X24 394 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 RFFLQ8WZ73 363 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 NAA15Q9BXJ9 866 aaKnown RBP17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 HDAC8Q9BY41 377 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 NRSN2Q9GZP1 204 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 PDCL3Q9H2J4 239 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 IL36AQ9UHA7 158 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 PAXBP1Q9Y5B6 917 aa17.07■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 DOCK4Q8N1I0 1966 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 SRGAP2O75044 1071 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 LEFTY1O75610 366 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ZMPSTE24O75844 475 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ENDOD1O94919 500 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 HNRNPA2B1P22626 353 aaKnown RBP17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 DGKAP23743 735 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ITPKBP27987 946 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 EIF2S3P41091 472 aaKnown RBP17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 CLDN2P57739 230 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ZNF211Q13398 564 aaPredicted RBP17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 TMEM259Q4ZIN3 620 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 KLHDC7AQ5VTJ3 777 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 SEL1L3Q68CR1 1132 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 DPY19L3Q6ZPD9 716 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 NOP9Q86U38 636 aaKnown RBP17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ERICH1Q86X53 443 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 FAM114A1Q8IWE2 563 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 SLC22A18ASQ8N1D0 253 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 OR13H1Q8NG92 308 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 CFAP57Q96MR6 1250 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 CALN1Q9BXU9 219 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 DYRK4Q9NR20 520 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 KLHL11Q9NVR0 708 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 TMEM59LQ9UK28 342 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 AK5Q9Y6K8 562 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 WASF2Q9Y6W5 498 aa17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 URB1O60287 2271 aaKnown RBP17.06■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ARID1BQ8NFD5 2236 aaPredicted RBP17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ILVBLA1L0T0 632 aa17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 GOLGA8SH3BPF8 625 aa17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 GIMD1P0DJR0 217 aa17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ABCG1P45844 678 aa17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 SERPINH1P50454 418 aaKnown RBP17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ARF5P84085 180 aa17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 CCDC15Q0P6D6 951 aa17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 RAB6CQ53S08 254 aa17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ACBD5Q5T8D3 534 aaPredicted RBP17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ABI3BPQ7Z7G0 1075 aa17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 FAM131BQ86XD5 332 aa17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 OR4C6Q8NH72 309 aa17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 HAPLN3Q96S86 360 aa17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 RAB6CQ9H0N0 254 aa17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 CLCA2Q9UQC9 943 aa17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ATMQ13315 3056 aa17.05■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 FFAR2O15552 330 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 PCDH8O95206 1070 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 LSM8O95777 96 aaKnown RBP17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 CD160O95971 181 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 MMEP08473 750 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 UCHL3P15374 230 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 AKT2P31751 481 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 RECQLP46063 649 aaPredicted RBP17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 NOMO3P69849 1222 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 FGL2Q14314 439 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 RETSATQ6NUM9 610 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ZNF783Q6ZMS7 281 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 CACTIN-AS1Q8N1I8 211 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 DCBLD1Q8N8Z6 715 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 EPS8L1Q8TE68 723 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 CPA5Q8WXQ8 436 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 PPP1R16AQ96I34 528 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 SPON2Q9BUD6 331 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ZYG11BQ9C0D3 744 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 CEP44Q9C0F1 390 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 CLSTN2Q9H4D0 955 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ATP13A1Q9HD20 1204 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ACTL7AQ9Y615 435 aa17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 GCN1Q92616 2671 aaKnown RBP17.04■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 F8VZ95 297 aa17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 PIAS2O75928 621 aa17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ADRB3P13945 408 aa17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ITGB7P26010 798 aa17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ERCC5P28715 1186 aaPredicted RBP17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 NEK3P51956 506 aa17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 GNA12Q03113 381 aa17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 NAA35Q5VZE5 725 aa17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 ARCQ7LC44 396 aa17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 DRC7Q8IY82 874 aa17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 PCDH20Q8N6Y1 951 aaKnown RBP17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 EMC1Q8N766 993 aa17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 BMFQ96LC9 184 aa17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 METTL5Q9NRN9 209 aaKnown RBP17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 GPR27Q9NS67 375 aa17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 SAMSN1Q9NSI8 373 aaKnown RBP17.03■□□□□ 0.32
VPS9D1-AS1-201ENST00000562298 TMEM51Q9NW97 253 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms