RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 PCDHGA7Q9Y5G6 932 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 COPG1Q9Y678 874 aaKnown RBP18.92■□□□□ 0.62
BBS4-204ENST00000562084 PARP14Q460N5 1801 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 PTPRFP10586 1907 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 RNF103O00237 685 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 TRIM24O15164 1050 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 GRAP2O75791 330 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 DDHD2O94830 711 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 PFKMP08237 780 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 ARL4AP40617 200 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 MLH1P40692 756 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 STT3AP46977 705 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 LAMTOR4Q0VGL1 99 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 ARL13AQ5H913 290 aaPredicted RBP18.92■□□□□ 0.62
BBS4-204ENST00000562084 NHSL2Q5HYW2 709 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 NXNQ6DKJ4 435 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 HACD2Q6Y1H2 254 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 NCCRP1Q6ZVX7 275 aaPredicted RBP18.92■□□□□ 0.62
BBS4-204ENST00000562084 TMEM135Q86UB9 458 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 CLVS1Q8IUQ0 354 aaPredicted RBP18.92■□□□□ 0.62
BBS4-204ENST00000562084 DQX1Q8TE96 717 aaKnown RBP18.92■□□□□ 0.62
BBS4-204ENST00000562084 TFAP2CQ92754 450 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 WNK4Q96J92 1243 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 HHIPL1Q96JK4 782 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 FAR2Q96K12 515 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 C11orf84Q9BUA3 381 aaPredicted RBP18.92■□□□□ 0.62
BBS4-204ENST00000562084 NT5C1AQ9BXI3 368 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 LRRC4Q9HBW1 653 aa18.92■□□□□ 0.62
BBS4-204ENST00000562084 MRM3Q9HC36 420 aaKnown RBP18.92■□□□□ 0.62
BBS4-204ENST00000562084 NPHS1O60500 1241 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 BAIAP3O94812 1187 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 ESRRBO95718 433 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 LTFP02788 710 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 CHRNGP07510 517 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 HSPA8P11142 646 aaKnown RBP18.91■□□□□ 0.62
BBS4-204ENST00000562084 POLD2P49005 469 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 CSRP3P50461 194 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 IFRD2Q12894 506 aaPredicted RBP18.91■□□□□ 0.62
BBS4-204ENST00000562084 ZBTB17Q13105 803 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 STXBP2Q15833 593 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 KIZQ2M2Z5 673 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 ANO4Q32M45 955 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 SNRNP48Q6IEG0 339 aaKnown RBP18.91■□□□□ 0.62
BBS4-204ENST00000562084 ELMSAN1Q6PJG2 1045 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 HERC6Q8IVU3 1022 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 ANKRD52Q8NB46 1076 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 ZNF280CQ8ND82 737 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 REPS2Q8NFH8 660 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 LRTOMTQ8WZ04 291 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 KHSRPQ92945 711 aaKnown RBP eCLIP18.91■□□□□ 0.621e-7■■■□□ 16.7
BBS4-204ENST00000562084 C12orf43Q96C57 262 aaKnown RBP18.91■□□□□ 0.62
BBS4-204ENST00000562084 ATG4CQ96DT6 458 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 CNDP2Q96KP4 475 aaKnown RBP18.91■□□□□ 0.62
BBS4-204ENST00000562084 ZNF512Q96ME7 567 aaPredicted RBP18.91■□□□□ 0.62
BBS4-204ENST00000562084 ARMC1Q9NVT9 282 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 BFARQ9NZS9 450 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 TMEM9Q9P0T7 183 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 TLK1Q9UKI8 766 aa18.91■□□□□ 0.62
BBS4-204ENST00000562084 A0A1B0GTW7 788 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 ITGB3P05106 788 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 CYP2C8P10632 490 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 CYP2C9P11712 490 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 CYP3A5P20815 502 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 MYF6P23409 242 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 MSX2P35548 267 aaPredicted RBP18.9■□□□□ 0.62
BBS4-204ENST00000562084 PFKPQ01813 784 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 GOLGA7BQ2TAP0 167 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 INTS11Q5TA45 600 aaKnown RBP18.9■□□□□ 0.62
BBS4-204ENST00000562084 SPRYD7Q5W111 196 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 GRAMD4Q6IC98 578 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 ZBTB49Q6ZSB9 765 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 RASAL3Q86YV0 1011 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 RNF148Q8N7C7 305 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 GOLM1Q8NBJ4 401 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 DDHD1Q8NEL9 900 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 PHF12Q96QT6 1004 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 KCTD15Q96SI1 283 aaPredicted RBP18.9■□□□□ 0.62
BBS4-204ENST00000562084 TCF12Q99081 682 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 MCMBPQ9BTE3 642 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 FTHL17Q9BXU8 183 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 UPF3AQ9H1J1 476 aaKnown RBP18.9■□□□□ 0.62
BBS4-204ENST00000562084 FZD8Q9H461 694 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 ASB7Q9H672 318 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 LIN28AQ9H9Z2 209 aaKnown RBP18.9■□□□□ 0.62
BBS4-204ENST00000562084 AS3MTQ9HBK9 375 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 SPAG4Q9NPE6 437 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 TNFSF13BQ9Y275 285 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 USP3Q9Y6I4 520 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 TRIM64BA6NI03 449 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 ERI2A8K979 691 aaKnown RBP18.9■□□□□ 0.62
BBS4-204ENST00000562084 STX16-NPEPL1H3BU86 382 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 AMHP03971 560 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 STAT5BP51692 787 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 NDST1P52848 882 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 NME5P56597 212 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 NAA20P61599 178 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 SP2Q02086 613 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 TNFAIP2Q03169 654 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 RELAQ04206 551 aa18.9■□□□□ 0.62
BBS4-204ENST00000562084 MTA1Q13330 715 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms