RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 MARC1Q5VT66 337 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 DENND5AQ6IQ26 1287 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 KDELC1Q6UW63 502 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 TFAP2DQ7Z6R9 452 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 STRA8Q7Z7C7 330 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 SLC39A11Q8N1S5 342 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 ARMC2Q8NEN0 867 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 PTPRN2Q92932 1015 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 AZIN2Q96A70 460 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 TRMT2BQ96GJ1 504 aaKnown RBP12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 ZNF419Q96HQ0 510 aaPredicted RBP12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 MYRFLQ96LU7 910 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 RMDN2Q96LZ7 410 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 C7orf26Q96N11 449 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 ZNF599Q96NL3 588 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 RPRD1AQ96P16 312 aaPredicted RBP12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 RANBP9Q96S59 729 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 FSD1LQ9BXM9 530 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 SLC13A1Q9BZW2 595 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 C12orf65Q9H3J6 166 aaKnown RBP12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 CCSER2Q9H7U1 834 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 ARNT2Q9HBZ2 717 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 TMEM39AQ9NV64 488 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 SLC17A6Q9P2U8 582 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 MAFFQ9ULX9 164 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 TCAF1Q9Y4C2 921 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 PSAT1Q9Y617 370 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 DOCK4Q8N1I0 1966 aa12.85□□□□□ -0.35
AC055717.2-201ENST00000561864 ACSL4O60488 711 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 CNTN5O94779 1100 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 ABLIM3O94929 683 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 HMBSP08397 361 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 CLTBP09497 229 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 LAG3P18627 525 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 PAMP19021 973 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 NMBRP28336 390 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 PPP3CCP48454 512 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 POLD2P49005 469 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 SLC11A2P49281 568 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 DSG1Q02413 1049 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 BNIP1Q12981 228 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 PDE1CQ14123 709 aaPredicted RBP12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 VEPH1Q14D04 833 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 POLD3Q15054 466 aaPredicted RBP12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 UGP2Q16851 508 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 NADSYN1Q6IA69 706 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 RANBP10Q6VN20 620 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 CCDC91Q7Z6B0 441 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 LCA5Q86VQ0 697 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 CNTN4Q8IWV2 1026 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 CMTR2Q8IYT2 770 aaKnown RBP12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 ANKLE1Q8NAG6 615 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 TOP1MTQ969P6 601 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 E2F7Q96AV8 911 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 TADA1Q96BN2 335 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 ZNF689Q96CS4 500 aaPredicted RBP12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 MFSD3Q96ES6 412 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 MRGPRX2Q96LB1 330 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 ZNF512Q96ME7 567 aaPredicted RBP12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 MCMBPQ9BTE3 642 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 TRIM55Q9BYV6 548 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 NACA2Q9H009 215 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 ATP13A1Q9HD20 1204 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 CHRAC1Q9NRG0 131 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 TRPM5Q9NZQ8 1165 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 MAGED2Q9UNF1 606 aaPredicted RBP12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 ATP11BQ9Y2G3 1177 aa12.84□□□□□ -0.35
AC055717.2-201ENST00000561864 TET1Q8NFU7 2136 aa12.83□□□□□ -0.35
AC055717.2-201ENST00000561864 ZNF840PA6NDX5 716 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 PLIN3O60664 434 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 PRAMEF11O60813 436 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 SIN3BO75182 1162 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 PMPCBO75439 489 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 ATP5HO75947 161 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 MT-CYBP00156 380 aaPredicted RBP12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 TPH1P17752 444 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 RPL17P18621 184 aaKnown RBP12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 DNAJB1P25685 340 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 TYK2P29597 1187 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 ALDH1A3P47895 512 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 HARS2P49590 506 aaKnown RBP12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 WNT3AP56704 352 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 CREMQ03060 361 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 SERINC3Q13530 473 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 SLC14A2Q15849 920 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 CCDC153Q494R4 210 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 TTC31Q49AM3 519 aaPredicted RBP12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 HSP90AA5PQ58FG0 334 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 FAM133BQ5BKY9 247 aaKnown RBP12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 RABGAP1LQ5R372 815 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 SPOUT1Q5T280 376 aaKnown RBP12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 TMCO4Q5TGY1 634 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 KIAA0930Q6ICG6 404 aaPredicted RBP12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 NUDCD3Q8IVD9 361 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 GPR65Q8IYL9 337 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 TNS4Q8IZW8 715 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 LGI2Q8N0V4 545 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 DCLK2Q8N568 766 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 FITM2Q8N6M3 262 aa12.83□□□□□ -0.36
AC055717.2-201ENST00000561864 ZNF461Q8TAF7 563 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms