RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 CDC6Q99741 560 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 AGPAT1Q99943 283 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 OSBPL2Q9H1P3 480 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 TNKS2Q9H2K2 1166 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 NDFIP2Q9NV92 336 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 SEPT11Q9NVA2 429 aaKnown RBP10.52□□□□□ -0.73
CLK3-205ENST00000561673 TOR4AQ9NXH8 423 aa10.52□□□□□ -0.73
CLK3-205ENST00000561673 TPX2Q9ULW0 747 aaKnown RBP10.52□□□□□ -0.73
CLK3-205ENST00000561673 A0A1B0GTQ1 180 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 TCRBV5S1A1TA0A578 114 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 SIGLEC16A6NMB1 481 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 TLR4O00206 839 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 KPNA3O00505 521 aaPredicted RBP10.51□□□□□ -0.73
CLK3-205ENST00000561673 CD160O95971 181 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 CALB1P05937 261 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 PLEKP08567 350 aaPredicted RBP10.51□□□□□ -0.73
CLK3-205ENST00000561673 ATXN1LP0C7T5 689 aaKnown RBP10.51□□□□□ -0.73
CLK3-205ENST00000561673 ACVRL1P37023 503 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 GRK6P43250 576 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 SERPINH1P50454 418 aaKnown RBP10.51□□□□□ -0.73
CLK3-205ENST00000561673 ARF5P84085 180 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 GNA12Q03113 381 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 SLC20A2Q08357 652 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 SHBQ15464 509 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 PIP5KL1Q5T9C9 394 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 MANEALQ5VSG8 457 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 RETSATQ6NUM9 610 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 C22orf39Q6P5X5 142 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 DPY19L3Q6ZPD9 716 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 MON1BQ7L1V2 547 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 IRF2BP2Q7Z5L9 587 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 NLRP14Q86W24 1093 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 TRIM69Q86WT6 500 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 C3orf20Q8ND61 904 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 ARRDC3Q96B67 414 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 CCDC114Q96M63 670 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 ELF4Q99607 663 aaPredicted RBP10.51□□□□□ -0.73
CLK3-205ENST00000561673 SELENOOQ9BVL4 669 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 NAT10Q9H0A0 1025 aaKnown RBP10.51□□□□□ -0.73
CLK3-205ENST00000561673 ATP13A1Q9HD20 1204 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 IL36AQ9UHA7 158 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 DNAI1Q9UI46 699 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 ZMIZ1Q9ULJ6 1067 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 NEU3Q9UQ49 428 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 APOBEC2Q9Y235 224 aaKnown RBP10.51□□□□□ -0.73
CLK3-205ENST00000561673 ACTL7AQ9Y615 435 aa10.51□□□□□ -0.73
CLK3-205ENST00000561673 GOLGA8CPA6NN73 597 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 RNGTTO60942 597 aaKnown RBP10.5□□□□□ -0.73
CLK3-205ENST00000561673 LEFTY1O75610 366 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 LRIG2O94898 1065 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 DKK1O94907 266 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 PRNPP04156 253 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 RHOQP17081 205 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 GPD1P21695 349 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 NUDT1P36639 197 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 DNA2P51530 1060 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 NXPH1P58417 271 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 RPL7AP62424 266 aaKnown RBP10.5□□□□□ -0.73
CLK3-205ENST00000561673 NAPEPLDQ6IQ20 393 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 SPATS2Q86XZ4 545 aaKnown RBP10.5□□□□□ -0.73
CLK3-205ENST00000561673 GATAD2AQ86YP4 633 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 PYROXD2Q8N2H3 581 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 MFSD2AQ8NA29 543 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 GRIN3AQ8TCU5 1115 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 SAP25Q8TEE9 199 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 ARHGEF2Q92974 986 aaKnown RBP10.5□□□□□ -0.73
CLK3-205ENST00000561673 BPIFA3Q9BQP9 254 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 HDAC8Q9BY41 377 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 CEP44Q9C0F1 390 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 RETREG1Q9H6L5 497 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 PREBQ9HCU5 417 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 GDF3Q9NR23 364 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 TMEM248Q9NWD8 314 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 TAS2R14Q9NYV8 317 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 DMTF1Q9Y222 760 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 FCF1Q9Y324 198 aaKnown RBP10.5□□□□□ -0.73
CLK3-205ENST00000561673 KNL1Q8NG31 2342 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 CELSR3Q9NYQ7 3312 aa10.5□□□□□ -0.73
CLK3-205ENST00000561673 CACNA1BQ00975 2339 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 A0A1W2PQU0 124 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 TMEM8BA6NDV4 472 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 SMTNL1A8MU46 457 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 PRAMEF26H0Y7S4 382 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 SLC31A1O15431 190 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 TNFSF14O43557 240 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 CCDC172P0C7W6 258 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 FERP16591 822 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 RECQLP46063 649 aaPredicted RBP10.49□□□□□ -0.73
CLK3-205ENST00000561673 MAPKAPK2P49137 400 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 ZNF143P52747 638 aaPredicted RBP10.49□□□□□ -0.73
CLK3-205ENST00000561673 CCDC15Q0P6D6 951 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 SCAPQ12770 1279 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 STAT4Q14765 748 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 ZNF284Q2VY69 593 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 SETMARQ53H47 684 aaPredicted RBP10.49□□□□□ -0.73
CLK3-205ENST00000561673 SLC45A4Q5BKX6 768 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 CARD16Q5EG05 197 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 PPP1R15BQ5SWA1 713 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 ACAD10Q6JQN1 1059 aa10.49□□□□□ -0.73
CLK3-205ENST00000561673 CAVIN1Q6NZI2 390 aaKnown RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms