RNA–Protein interactions for RNA: ENST00000561660.1

FANCA-206, Transcript of FA complementation group A, humanhuman

TSL 5

Gene FANCA, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-206ENST00000561660 SNX11Q9Y5W9 270 aa18.38■□□□□ 0.53
FANCA-206ENST00000561660 NYNRINQ9P2P1 1898 aaKnown RBP18.37■□□□□ 0.53
FANCA-206ENST00000561660 C1QTNF3-AMACRE9PGA6 284 aa18.37■□□□□ 0.53
FANCA-206ENST00000561660 PSMA2P25787 234 aa18.37■□□□□ 0.53
FANCA-206ENST00000561660 GRIA4P48058 902 aa18.37■□□□□ 0.53
FANCA-206ENST00000561660 SLC20A2Q08357 652 aa18.37■□□□□ 0.53
FANCA-206ENST00000561660 SLC14A1Q13336 389 aa18.37■□□□□ 0.53
FANCA-206ENST00000561660 CA9Q16790 459 aa18.37■□□□□ 0.53
FANCA-206ENST00000561660 SKOR2Q2VWA4 1001 aaPredicted RBP18.37■□□□□ 0.53
FANCA-206ENST00000561660 PIP5KL1Q5T9C9 394 aa18.37■□□□□ 0.53
FANCA-206ENST00000561660 CYP4V2Q6ZWL3 525 aaPredicted RBP18.37■□□□□ 0.53
FANCA-206ENST00000561660 RTL3Q8N8U3 475 aaKnown RBP18.37■□□□□ 0.53
FANCA-206ENST00000561660 TMIEQ8NEW7 156 aa18.37■□□□□ 0.53
FANCA-206ENST00000561660 CPLX3Q8WVH0 158 aa18.37■□□□□ 0.53
FANCA-206ENST00000561660 SYN2Q92777 582 aaPredicted RBP18.37■□□□□ 0.53
FANCA-206ENST00000561660 CEP44Q9C0F1 390 aa18.37■□□□□ 0.53
FANCA-206ENST00000561660 KLC2Q9H0B6 622 aa18.37■□□□□ 0.53
FANCA-206ENST00000561660 MAGEH1Q9H213 219 aa18.37■□□□□ 0.53
FANCA-206ENST00000561660 CNOT8Q9UFF9 292 aaKnown RBP18.37■□□□□ 0.53
FANCA-206ENST00000561660 CAPN11Q9UMQ6 739 aa18.37■□□□□ 0.53
FANCA-206ENST00000561660 WASF2Q9Y6W5 498 aa18.37■□□□□ 0.53
FANCA-206ENST00000561660 ASPMQ8IZT6 3477 aa18.37■□□□□ 0.53
FANCA-206ENST00000561660 CABIN1Q9Y6J0 2220 aa18.37■□□□□ 0.53
FANCA-206ENST00000561660 TBC1D3DA0A087WVF3 549 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 TBC1D3IA0A087WXS9 549 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 TBC1D3EA0A087X179 549 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 TBC1D3KA0A087X1G2 549 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 TBC1D3FA6NER0 549 aaPredicted RBP18.36■□□□□ 0.53
FANCA-206ENST00000561660 WASH4PA8MWX3 477 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 TBC1D3LB9A6J9 549 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 KCNK3O14649 394 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 SLC7A4O43246 635 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 LATO43561 262 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 CREB3O43889 395 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 SH3BP5O60239 455 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 RAMP2O60895 175 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 GYPCP04921 128 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 TBC1D3HP0C7X1 549 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 EPHB2P29323 1055 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 CTSKP43235 329 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 RACK1P63244 317 aaKnown RBP18.36■□□□□ 0.53
FANCA-206ENST00000561660 ARSIQ5FYB1 569 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 TBC1D3GQ6DHY5 549 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 TBC1D3CQ6IPX1 549 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 LEKR1Q6ZMV7 388 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 TBC1D3Q8IZP1 549 aaPredicted RBP18.36■□□□□ 0.53
FANCA-206ENST00000561660 PCDH20Q8N6Y1 951 aaKnown RBP18.36■□□□□ 0.53
FANCA-206ENST00000561660 ZNF653Q96CK0 615 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 EPG5Q9HCE0 2579 aa18.36■□□□□ 0.53
FANCA-206ENST00000561660 CHD5Q8TDI0 1954 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 FRYQ5TBA9 3013 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 CXorf51AA0A1B0GTR3 108 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 SPAARA0A1B0GVQ0 90 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 A0A1W2PR77 199 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 LEFTY1O75610 366 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 AIF1P55008 147 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 ZBED6P86452 979 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 POLD3Q15054 466 aaPredicted RBP18.35■□□□□ 0.53
FANCA-206ENST00000561660 TEAD4Q15561 434 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 CARD16Q5EG05 197 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 IL27RAQ6UWB1 636 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 GRIN3AQ8TCU5 1115 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 FNIP1Q8TF40 1166 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 XPO4Q9C0E2 1151 aaKnown RBP18.35■□□□□ 0.53
FANCA-206ENST00000561660 KDM4CQ9H3R0 1056 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 SLC32A1Q9H598 525 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 IL36AQ9UHA7 158 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 PCSK1NQ9UHG2 260 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 WASF3Q9UPY6 502 aa18.35■□□□□ 0.53
FANCA-206ENST00000561660 FARP1Q9Y4F1 1045 aaPredicted RBP18.35■□□□□ 0.53
FANCA-206ENST00000561660 KPNA3O00505 521 aaPredicted RBP18.34■□□□□ 0.53
FANCA-206ENST00000561660 VILLO15195 856 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 KDELR3O43731 214 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 CER1O95813 267 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 TOP3BO95985 862 aaKnown RBP18.34■□□□□ 0.53
FANCA-206ENST00000561660 PRNPP04156 253 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 SERPING1P05155 500 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 ZNF883P0CG24 379 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 MIPP30301 263 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 MAT2AP31153 395 aaKnown RBP18.34■□□□□ 0.53
FANCA-206ENST00000561660 GKP32189 559 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 ETFBP38117 255 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 DNA2P51530 1060 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 CCNHP51946 323 aaPredicted RBP18.34■□□□□ 0.53
FANCA-206ENST00000561660 TDRD12Q587J7 1177 aaKnown RBP18.34■□□□□ 0.53
FANCA-206ENST00000561660 DBX2Q6ZNG2 339 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 NETO2Q8NC67 525 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 ISG20Q96AZ6 181 aaKnown RBP18.34■□□□□ 0.53
FANCA-206ENST00000561660 HMCESQ96FZ2 354 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 CCDC114Q96M63 670 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 KCTD15Q96SI1 283 aaPredicted RBP18.34■□□□□ 0.53
FANCA-206ENST00000561660 EPAS1Q99814 870 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 TM6SF2Q9BZW4 377 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 TM7SF3Q9NS93 570 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 MYO1AQ9UBC5 1043 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 AP4E1Q9UPM8 1137 aa18.34■□□□□ 0.53
FANCA-206ENST00000561660 A0A087X0T9 212 aa18.33■□□□□ 0.52
FANCA-206ENST00000561660 RASA4BC9J798 803 aa18.33■□□□□ 0.52
FANCA-206ENST00000561660 H0Y8X5 98 aa18.33■□□□□ 0.52
FANCA-206ENST00000561660 RASA4O43374 803 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms