RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, human

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERC1-215	ENST00000561436	ZNF782	Q6ZMW2	699 aa	Predicted RBP	4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	BBS12	Q6ZW61	710 aa		4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	BCDIN3D	Q7Z5W3	292 aa	Known RBP	4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	UEVLD	Q8IX04	471 aa		4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	LINC01465	Q8N7H1	131 aa		4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	ENDOV	Q8N8Q3	282 aa	Known RBP	4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	PPHLN1	Q8NEY8	458 aa	Known RBP	4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	ASB12	Q8WXK4	309 aa		4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	ARRDC3	Q96B67	414 aa		4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	SH3KBP1	Q96B97	665 aa		4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	PRR11	Q96HE9	360 aa	Predicted RBP	4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	PPP1R10	Q96QC0	940 aa	Known RBP	4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	SIN3A	Q96ST3	1273 aa		4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	REEP2	Q9BRK0	252 aa		4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	ELOVL1	Q9BW60	279 aa		4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	GPR63	Q9BZJ6	419 aa		4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	ABHD16B	Q9H3Z7	469 aa		4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	UBN1	Q9NPG3	1134 aa		4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	SLC25A13	Q9UJS0	675 aa		4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	TBX20	Q9UMR3	447 aa		4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	FRMD4B	Q9Y2L6	1034 aa		4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	GDA	Q9Y2T3	454 aa		4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	HEMK1	Q9Y5R4	338 aa	Predicted RBP	4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	COPG1	Q9Y678	874 aa	Known RBP	4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	SOS1	Q07889	1333 aa	Predicted RBP	4.09	□□□□□ -1.75
HERC1-215	ENST00000561436	USP54	Q70EL1	1684 aa		4.09	□□□□□ -1.76
HERC1-215	ENST00000561436	CYP3A7-CYP3A51P	A0A087WV96	503 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	WIPF3	A6NGB9	483 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436		A6NLC8	198 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	TMEM232	C9JQI7	657 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	POC1B-GALNT4	F8VUJ3	575 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436		M0QZQ0	153 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	KLK10	O43240	276 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	HEXIM1	O94992	359 aa	Known RBP	4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	CHRM5	P08912	532 aa	Predicted RBP	4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	WEE2	P0C1S8	567 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	CYP19A1	P11511	503 aa	Predicted RBP	4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	WT1	P19544	449 aa	Predicted RBP	4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	CYP3A7	P24462	503 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	CD38	P28907	300 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	CHRNA5	P30532	468 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	PGM1	P36871	562 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	UTRN	P46939	3433 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	AGTR2	P50052	363 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	FAM3B	P58499	235 aa	Predicted RBP	4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	TFF2	Q03403	129 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	AOX1	Q06278	1338 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	TBL3	Q12788	808 aa	Known RBP	4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	G3BP1	Q13283	466 aa	Known RBP eCLIP	4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	ALKBH1	Q13686	389 aa	Known RBP	4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	THOC5	Q13769	683 aa	Known RBP	4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	DCTN1	Q14203	1278 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	EIF4A2	Q14240	407 aa	Known RBP	4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	DEFB115	Q30KQ5	88 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	ZNF484	Q5JVG2	852 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	FAAH2	Q6GMR7	532 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	ANO7	Q6IWH7	933 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	RETSAT	Q6NUM9	610 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	ZNF530	Q6P9A1	599 aa	Predicted RBP	4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	SYCE2	Q6PIF2	218 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	LRRC8D	Q7L1W4	858 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	RSRC2	Q7L4I2	434 aa	Known RBP	4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	TMTC1	Q8IUR5	882 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	CPO	Q8IVL8	374 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	LAS2	Q8IYD9	372 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	GALNT4	Q8N4A0	578 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	VOPP1	Q96AW1	172 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	HVCN1	Q96D96	273 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	TRMT61A	Q96FX7	289 aa	Known RBP	4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	MASTL	Q96GX5	879 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	ABHD8	Q96I13	439 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	TIMP4	Q99727	224 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	NPAS1	Q99742	590 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	SH2D3A	Q9BRG2	576 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	ABHD14A	Q9BUJ0	271 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	TAOK3	Q9H2K8	898 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	PLEKHA2	Q9HB19	425 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	ERVK-5	Q9HDB9	667 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	ASNSD1	Q9NWL6	643 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	IRAK4	Q9NWZ3	460 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	AFG3L2	Q9Y4W6	797 aa		4.08	□□□□□ -1.76
HERC1-215	ENST00000561436	QSER1	Q2KHR3	1735 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	KCP	Q6ZWJ8	1503 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	VWA3A	A6NCI4	1184 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	TARM1	B6A8C7	271 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	PRRT4	C9JH25	899 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436		H3BNC9	293 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	GRM8	O00222	908 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	PEX12	O00623	359 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	ENO1	P06733	434 aa	Known RBP	4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	CHN1	P15882	459 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	ALDH1B1	P30837	517 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	HOXD12	P35452	270 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	GPD2	P43304	727 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	EIF5	P55010	431 aa	Known RBP	4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	FOXL2	P58012	376 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	MAPRE1	Q15691	268 aa	Known RBP	4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	CBWD5	Q5RIA9	395 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	LIPM	Q5VYY2	423 aa		4.07	□□□□□ -1.76
HERC1-215	ENST00000561436	KYAT3	Q6YP21	454 aa	Known RBP	4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms