RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, human

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPM1-231	ENST00000561395	NUP205	Q92621	2012 aa		7.69	□□□□□ -1.18
TPM1-231	ENST00000561395	EML5	Q05BV3	1969 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	CHD5	Q8TDI0	1954 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	NOTCH4	Q99466	2003 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	C2orf78	A6NCI8	922 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	DRGX	A6NNA5	263 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	GOLGA8K	D6RF30	607 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395		E7ESA3	106 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	KCNK1	O00180	336 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	DFFA	O00273	331 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	ACSL4	O60488	711 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	STC2	O76061	302 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	METTL18	O95568	372 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	ACSL3	O95573	720 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	C1R	P00736	705 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	LRG1	P02750	347 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	SHBG	P04278	402 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	C8A	P07357	584 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	ABHD2	P08910	425 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	TACR2	P21452	398 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	PTPN3	P26045	913 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	MAGEA4	P43358	317 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	HARS2	P49590	506 aa	Known RBP	7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	CLCN4	P51793	760 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	STARD6	P59095	220 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	SHC2	P98077	582 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	IFFO1	Q0D2I5	559 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	FASTKD3	Q14CZ7	662 aa	Known RBP	7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	C5orf22	Q49AR2	442 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	PABPC1L	Q4VXU2	614 aa	Known RBP	7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	FAM133B	Q5BKY9	247 aa	Known RBP	7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	TTMP	Q5BVD1	217 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	CEP85L	Q5SZL2	805 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	FNBP1L	Q5T0N5	605 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	FAM182A	Q5T1J6	154 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	FAXC	Q5TGI0	409 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	RAP1GAP2	Q684P5	730 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	NADSYN1	Q6IA69	706 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	FBXL22	Q6P050	247 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	CCDC13	Q8IYE1	715 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	UMODL1-AS1	Q8N2C9	162 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	ATPAF2	Q8N5M1	289 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	MCU	Q8NE86	351 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	DEPDC1B	Q8WUY9	529 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	IGSF8	Q969P0	613 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	EXOC4	Q96A65	974 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	AZIN2	Q96A70	460 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	ARL8A	Q96BM9	186 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	PKNOX2	Q96KN3	472 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	ZFR	Q96KR1	1074 aa	Known RBP	7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	TSGA13	Q96PP4	275 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	MYADM	Q96S97	322 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	WDR83	Q9BRX9	315 aa	Known RBP	7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	TMEM109	Q9BVC6	243 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	KLF16	Q9BXK1	252 aa	Predicted RBP	7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	LRRC3	Q9BY71	257 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	RNF38	Q9H0F5	515 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	NOL6	Q9H6R4	1146 aa	Known RBP	7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	ETNK1	Q9HBU6	452 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	EIF2B3	Q9NR50	452 aa	Known RBP	7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	SLC2A4RG	Q9NR83	387 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	NDFIP2	Q9NV92	336 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	DONSON	Q9NYP3	566 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	MPP6	Q9NZW5	540 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	ZNF212	Q9UDV6	495 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	COL4A2	P08572	1712 aa		7.68	□□□□□ -1.18
TPM1-231	ENST00000561395	DSP	P15924	2871 aa	Known RBP	7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	GOLGA6L7	A0A1B0GV03	622 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	KANSL1L	A0AUZ9	987 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	GOLGA6L10	A6NI86	522 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395		F5H5T6	163 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	ALOX15B	O15296	676 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	MAFK	O60675	156 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	BANF1	O75531	89 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	CNTN5	O94779	1100 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	LATS1	O95835	1130 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	OLFM2	O95897	454 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	PROS1	P07225	676 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	APRT	P07741	180 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	MYZAP	P0CAP1	466 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	CCNC	P24863	283 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	PSMB4	P28070	264 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	CDC25C	P30307	473 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	CORO1A	P31146	461 aa	Known RBP	7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	MAGEA3	P43357	314 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	SLC11A2	P49281	568 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	NDST2	P52849	883 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	IFI35	P80217	286 aa	Predicted RBP	7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	CDK16	Q00536	496 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	PDIA2	Q13087	525 aa	Known RBP	7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	ZBTB17	Q13105	803 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	HTR4	Q13639	388 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	UBXN2B	Q14CS0	331 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	LPAL2	Q16609	132 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	KYNU	Q16719	465 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	KRT71	Q3SY84	523 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	MSS51	Q4VC12	460 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	ALF	Q53S48	1182 aa		7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	DNAJC21	Q5F1R6	531 aa	Known RBP	7.67	□□□□□ -1.18
TPM1-231	ENST00000561395	ITPRIPL1	Q6GPH6	555 aa		7.67	□□□□□ -1.18

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