RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 PISDQ9UG56 409 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 DCTN4Q9UJW0 460 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 NUDT5Q9UKK9 219 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 ITGA11Q9UKX5 1188 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 FZD4Q9ULV1 537 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 CA5BQ9Y2D0 317 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 ZNF510Q9Y2H8 683 aa5.52□□□□□ -1.53
HERC1-213ENST00000561359 ANKHD1Q8IWZ3 2542 aaKnown RBP5.52□□□□□ -1.53
HERC1-213ENST00000561359 PLXNA2O75051 1894 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 ATP8B3O60423 1300 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 PRAMEF33A0A0G2JMD5 474 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 NPHP3-ACAD11A0A0J9YXS1 232 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 FAM95CA0A1B0GW59 222 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 SLC12A8A0AV02 714 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 PRR19A6NJB7 356 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 AGRPO00253 132 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 MUSKO15146 869 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 LATO43561 262 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 PRAMEF10O60809 474 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 STC2O76061 302 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 KLKB1P03952 638 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 HMBSP08397 361 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 DLDP09622 509 aaKnown RBP5.51□□□□□ -1.53
HERC1-213ENST00000561359 TMEM191BP0C7N4 346 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 GOT1P17174 413 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 SCP2P22307 547 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 CORO1AP31146 461 aaKnown RBP5.51□□□□□ -1.53
HERC1-213ENST00000561359 SLC8A1P32418 973 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 NUDT1P36639 197 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 PSMD8P48556 350 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 PDX1P52945 283 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 POU5F1Q01860 360 aaKnown RBP5.51□□□□□ -1.53
HERC1-213ENST00000561359 GNL2Q13823 731 aaKnown RBP5.51□□□□□ -1.53
HERC1-213ENST00000561359 DRAP1Q14919 205 aaPredicted RBP5.51□□□□□ -1.53
HERC1-213ENST00000561359 NR0B2Q15466 257 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 ZNF542PQ5EBM4 170 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 ZCCHC8Q6NZY4 707 aaKnown RBP5.51□□□□□ -1.53
HERC1-213ENST00000561359 PAOXQ6QHF9 649 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 CRELD2Q6UXH1 353 aaPredicted RBP5.51□□□□□ -1.53
HERC1-213ENST00000561359 SND1Q7KZF4 910 aaKnown RBP eCLIP5.51□□□□□ -1.53
HERC1-213ENST00000561359 KCNK18Q7Z418 384 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 B3GNT8Q7Z7M8 397 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 ZDHHC13Q8IUH4 622 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 MYCT1Q8N699 235 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 WDR48Q8TAF3 677 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 EPS8L3Q8TE67 593 aaKnown RBP5.51□□□□□ -1.53
HERC1-213ENST00000561359 WFIKKN2Q8TEU8 576 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 POMGNT1Q8WZA1 660 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 ALKBH8Q96BT7 664 aaKnown RBP5.51□□□□□ -1.53
HERC1-213ENST00000561359 HPDLQ96IR7 371 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 HEXIM2Q96MH2 286 aaKnown RBP5.51□□□□□ -1.53
HERC1-213ENST00000561359 MYOCQ99972 504 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 FAM213AQ9BRX8 229 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 SLC12A9Q9BXP2 914 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 CALN1Q9BXU9 219 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 B3GNT5Q9BYG0 378 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 RAB34Q9BZG1 259 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 FOXP3Q9BZS1 431 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 MTMR12Q9C0I1 747 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 DPEP3Q9H4B8 488 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 FBXO44Q9H4M3 255 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 CAAP1Q9H8G2 361 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 PREBQ9HCU5 417 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 DMAP1Q9NPF5 467 aaPredicted RBP5.51□□□□□ -1.53
HERC1-213ENST00000561359 ABCB8Q9NUT2 735 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 DNAJC28Q9NX36 388 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 SIX4Q9UIU6 781 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 DMTF1Q9Y222 760 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 MED13LQ71F56 2210 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 TP53BP1Q12888 1972 aaPredicted RBP5.51□□□□□ -1.53
HERC1-213ENST00000561359 AKAP9Q99996 3911 aa5.51□□□□□ -1.53
HERC1-213ENST00000561359 HIVEP3Q5T1R4 2406 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 RP1P56715 2156 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 UBE4BO95155 1302 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 TMEM238LA0A1B0GVL6 79 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 A0A1W2PQ27 194 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 A0A1W2PQ64 194 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 A0A1W2PQC6 194 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 EME2A4GXA9 379 aaPredicted RBP5.5□□□□□ -1.53
HERC1-213ENST00000561359 PP2D1A8MPX8 630 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 PRAMEF26H0Y7S4 382 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 TMX2-CTNND1H3BSU7 103 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 CASC3O15234 703 aaKnown RBP5.5□□□□□ -1.53
HERC1-213ENST00000561359 CNTN5O94779 1100 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 TIAF1O95411 115 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 B3GALT4O96024 378 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 PRF1P14222 555 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 POLR2EP19388 210 aaKnown RBP5.5□□□□□ -1.53
HERC1-213ENST00000561359 HLA-FP30511 346 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 SLC6A4P31645 630 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 ST8SIA6P61647 398 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 HNRNPKP61978 463 aaKnown RBP eCLIP5.5□□□□□ -1.53
HERC1-213ENST00000561359 TRIM29Q14134 588 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 POSTNQ15063 836 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 DEFB133Q30KQ1 61 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 SETMARQ53H47 684 aaPredicted RBP5.5□□□□□ -1.53
HERC1-213ENST00000561359 MBLAC2Q68D91 279 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.5□□□□□ -1.53
HERC1-213ENST00000561359 DTHD1Q6ZMT9 781 aa5.5□□□□□ -1.53
HERC1-213ENST00000561359 DYMQ7RTS9 669 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms