RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 CCDC170Q8IYT3 715 aa20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 CHST14Q8NCH0 376 aa20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 PIP4K2CQ8TBX8 421 aa20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 GRIN3AQ8TCU5 1115 aa20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 ZNF419Q96HQ0 510 aaPredicted RBP20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 NEUROG2Q9H2A3 272 aa20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 LRRC19Q9H756 370 aa20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 PCDH18Q9HCL0 1135 aa20.31■□□□□ 0.84
TSPAN3-210ENST00000561277 PATE3B3GLJ2 98 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 C1QTNF3-AMACRE9PGA6 284 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 PLK4O00444 970 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 ZNF821O75541 412 aaPredicted RBP20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 SEMA4FO95754 770 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 CTSLP07711 333 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 MAGEA1P43355 309 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 NDST2P52849 883 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 CDH6P55285 790 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 SFSWAPQ12872 951 aaKnown RBP20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 SERINC3Q13530 473 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 DPYSQ14117 519 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 FAM46CQ5VWP2 391 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 DPY19L3Q6ZPD9 716 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 POLNQ7Z5Q5 900 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 SYT12Q8IV01 421 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 PCDH20Q8N6Y1 951 aaKnown RBP20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 NPWQ8N729 165 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 SNX19Q92543 992 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 CSPG4P5Q96PW8 444 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 C6orf106Q9H6K1 298 aaPredicted RBP20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 SGK2Q9HBY8 427 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 KLHL11Q9NVR0 708 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 LCMT1Q9UIC8 334 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 INTUQ9ULD6 942 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 PPM1HQ9ULR3 514 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 GON4LQ3T8J9 2241 aa20.3■□□□□ 0.84
TSPAN3-210ENST00000561277 ZSCAN5CA6NGD5 496 aaPredicted RBP20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 MAOBP27338 520 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 CDC25BP30305 580 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 CHRNA3P32297 505 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 HCAR3P49019 387 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 TAS2R40P59535 323 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 LMNB2Q03252 620 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 SPA17Q15506 151 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 AASDHQ4L235 1098 aaPredicted RBP20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 ATP13A4Q4VNC1 1196 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 SYCP2LQ5T4T6 812 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 DCAF12L1Q5VU92 463 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 CADM4Q8NFZ8 388 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 SLC39A8Q9C0K1 460 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 PILRBQ9UKJ0 227 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 MFHAS1Q9Y4C4 1052 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 DFFAO00273 331 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 KPNA3O00505 521 aaPredicted RBP20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 TMCC1O94876 653 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 LCA5LO95447 670 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 CD48P09326 243 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 AMPD1P23109 780 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 MAN1A1P33908 653 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 DRD3P35462 400 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 PAPOLAP51003 745 aaKnown RBP20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 CARD16Q5EG05 197 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 WDR45BQ5MNZ6 344 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 ZFYVE27Q5T4F4 411 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 TMTC1Q8IUR5 882 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 RYBPQ8N488 228 aaPredicted RBP20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 OR6K2Q8NGY2 324 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 MIR1-1HGQ9H1L0 117 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 ETNK2Q9NVF9 386 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 IL36AQ9UHA7 158 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 FZD4Q9ULV1 537 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 TFR2Q9UP52 801 aa20.29■□□□□ 0.84
TSPAN3-210ENST00000561277 CXorf51AA0A1B0GTR3 108 aa20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 ARHGAP42A6NI28 874 aa20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 METTL12A8MUP2 240 aa20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 GDF9O60383 454 aa20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 MTA2O94776 668 aa20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 FSBPO95073 299 aa20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 CFIP05156 583 aa20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 FECHP22830 423 aa20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 CCNHP51946 323 aaPredicted RBP20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 TRIM61Q5EBN2 209 aa20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 ARSIQ5FYB1 569 aa20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 TMCO3Q6UWJ1 677 aa20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 ARHGAP12Q8IWW6 846 aa20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 OR14C36Q8NHC7 312 aa20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 CALN1Q9BXU9 219 aa20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 RXFP3Q9NSD7 469 aa20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 PCDHA13Q9Y5I0 950 aa20.28■□□□□ 0.84
TSPAN3-210ENST00000561277 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.27■□□□□ 0.84
TSPAN3-210ENST00000561277 J3KR12 359 aa20.27■□□□□ 0.84
TSPAN3-210ENST00000561277 RNF103O00237 685 aa20.27■□□□□ 0.84
TSPAN3-210ENST00000561277 KHNYNO15037 678 aaKnown RBP20.27■□□□□ 0.84
TSPAN3-210ENST00000561277 LEFTY1O75610 366 aa20.27■□□□□ 0.84
TSPAN3-210ENST00000561277 NDUFA10O95299 355 aa20.27■□□□□ 0.84
TSPAN3-210ENST00000561277 PRNPP04156 253 aa20.27■□□□□ 0.84
TSPAN3-210ENST00000561277 DPP6P42658 865 aa20.27■□□□□ 0.84
TSPAN3-210ENST00000561277 NOP2P46087 812 aaKnown RBP20.27■□□□□ 0.84
TSPAN3-210ENST00000561277 MMRN1Q13201 1228 aa20.27■□□□□ 0.84
TSPAN3-210ENST00000561277 NCEH1Q6PIU2 408 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms