RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 WASF2Q9Y6W5 498 aa14.18□□□□□ -0.14
TPM1-230ENST00000561266 DUSP10Q9Y6W6 482 aa14.18□□□□□ -0.14
TPM1-230ENST00000561266 KNL1Q8NG31 2342 aa14.18□□□□□ -0.14
TPM1-230ENST00000561266 DCHS1Q96JQ0 3298 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 PCDH15Q96QU1 1955 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 EIF3CLB5ME19 914 aaKnown RBP14.17□□□□□ -0.14
TPM1-230ENST00000561266 GDF9O60383 454 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 NDUFA10O95299 355 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 IL1BP01584 269 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 DNTTP04053 509 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 DESP17661 470 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 HTR7P34969 479 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 PAPOLAP51003 745 aaKnown RBP14.17□□□□□ -0.14
TPM1-230ENST00000561266 CDH6P55285 790 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 YBEYP58557 167 aaPredicted RBP14.17□□□□□ -0.14
TPM1-230ENST00000561266 ZNF33AQ06730 810 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 BYSLQ13895 437 aaKnown RBP14.17□□□□□ -0.14
TPM1-230ENST00000561266 DPYSL3Q14195 570 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 ELAVL3Q14576 367 aaKnown RBP14.17□□□□□ -0.14
TPM1-230ENST00000561266 CYTH1Q15438 398 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 ATXN7L2Q5T6C5 722 aaPredicted RBP14.17□□□□□ -0.14
TPM1-230ENST00000561266 SLC36A4Q6YBV0 504 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 CCDC170Q8IYT3 715 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 OR6K2Q8NGY2 324 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 PIP4K2CQ8TBX8 421 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 RAPGEF5Q92565 580 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 PIGKQ92643 395 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 NSMCE3Q96MG7 304 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 HSPA12BQ96MM6 686 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 EIF3CQ99613 913 aaKnown RBP14.17□□□□□ -0.14
TPM1-230ENST00000561266 NCAPGQ9BPX3 1015 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 TM6SF2Q9BZW4 377 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 FBXL12Q9NXK8 326 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 PILRBQ9UKJ0 227 aa14.17□□□□□ -0.14
TPM1-230ENST00000561266 SPTBN4Q9H254 2564 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 C3orf70A6NLC5 250 aaPredicted RBP14.16□□□□□ -0.14
TPM1-230ENST00000561266 H3BRJ5 948 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 INSIG1O15503 277 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 BUB1O43683 1085 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 NDUFS2O75306 463 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 TMCC1O94876 653 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 CHRNA3P32297 505 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 ZBTB16Q05516 673 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 SLC20A2Q08357 652 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 CNTN1Q12860 1018 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 CSRP2Q16527 193 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 ARSIQ5FYB1 569 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 FAM182AQ5T1J6 154 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 LYSMD4Q5XG99 296 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 RETSATQ6NUM9 610 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 CYP2U1Q7Z449 544 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 C11orf74Q86VG3 221 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 TMTC1Q8IUR5 882 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 HDDC3Q8N4P3 179 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 PCDH19Q8TAB3 1148 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 LRRN4Q8WUT4 740 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 OR8D1Q8WZ84 308 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 FAM131CQ96AQ9 280 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 ORAI3Q9BRQ5 295 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 LACRTQ9GZZ8 138 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 EBF2Q9HAK2 575 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 LHX3Q9UBR4 397 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 CACNA1EQ15878 2313 aa14.16□□□□□ -0.14
TPM1-230ENST00000561266 TP53BP1Q12888 1972 aaPredicted RBP14.16□□□□□ -0.14
TPM1-230ENST00000561266 METTL12A8MUP2 240 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 DAPK3O43293 454 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 BUB1BO60566 1050 aaPredicted RBP14.15□□□□□ -0.14
TPM1-230ENST00000561266 PRAMEF11O60813 436 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 RNASEH1O60930 286 aaKnown RBP14.15□□□□□ -0.14
TPM1-230ENST00000561266 GJB3O75712 270 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 RNASEH2AO75792 299 aaKnown RBP14.15□□□□□ -0.14
TPM1-230ENST00000561266 SEMA4FO95754 770 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 ZNF806P0C7X5 589 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 C5AR1P21730 350 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 COMTP21964 271 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 OXTRP30559 389 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 MAN1A1P33908 653 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 ETFBP38117 255 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 RGRP47804 291 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 DNA2P51530 1060 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 CLCN6P51797 869 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 NDST2P52849 883 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 TAS2R38P59533 333 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 IRX4P78413 519 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 PARP15Q460N3 678 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 CARD16Q5EG05 197 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 DCAF12L1Q5VU92 463 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 PEAR1Q5VY43 1037 aaPredicted RBP14.15□□□□□ -0.14
TPM1-230ENST00000561266 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP14.15□□□□□ -0.14
TPM1-230ENST00000561266 PRR23CQ6ZRP0 262 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 USP30Q70CQ3 517 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 ZNF354CQ86Y25 554 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 RHOT2Q8IXI1 618 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 PCDH20Q8N6Y1 951 aaKnown RBP14.15□□□□□ -0.14
TPM1-230ENST00000561266 PQLC3Q8N755 202 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 C1orf216Q8TAB5 229 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 GRIN3AQ8TCU5 1115 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 GANCQ8TET4 914 aa14.15□□□□□ -0.14
TPM1-230ENST00000561266 BAG1Q99933 345 aaPredicted RBP14.15□□□□□ -0.14
TPM1-230ENST00000561266 CEP44Q9C0F1 390 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms