RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ADRA1BP35368 520 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 ACVRL1P37023 503 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 CCT8P50990 548 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 KRT83P78385 493 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 NRG1Q02297 640 aaPredicted RBP16.32■□□□□ 0.2
LMX1B-204ENST00000561065 HNRNPDQ14103 355 aaKnown RBP16.32■□□□□ 0.2
LMX1B-204ENST00000561065 SHBQ15464 509 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 PRAMEF14Q5SWL7 426 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 STRADAQ7RTN6 431 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 ADAT2Q7Z6V5 191 aaKnown RBP16.32■□□□□ 0.2
LMX1B-204ENST00000561065 DSG4Q86SJ6 1040 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 SLCO6A1Q86UG4 719 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 C3orf20Q8ND61 904 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 FAM172AQ8WUF8 416 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 BAP1Q92560 729 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 NAP1L5Q96NT1 182 aaPredicted RBP16.32■□□□□ 0.2
LMX1B-204ENST00000561065 ACE2Q9BYF1 805 aaPredicted RBP16.32■□□□□ 0.2
LMX1B-204ENST00000561065 RETREG1Q9H6L5 497 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 AIPL1Q9NZN9 384 aa16.32■□□□□ 0.2
LMX1B-204ENST00000561065 PPARGC1AQ9UBK2 798 aaKnown RBP16.32■□□□□ 0.2
LMX1B-204ENST00000561065 C1QTNF3-AMACRE9PGA6 284 aa16.31■□□□□ 0.2
LMX1B-204ENST00000561065 CBX4O00257 560 aa16.31■□□□□ 0.2
LMX1B-204ENST00000561065 CCP110O43303 1012 aa16.31■□□□□ 0.2
LMX1B-204ENST00000561065 LRIG2O94898 1065 aa16.31■□□□□ 0.2
LMX1B-204ENST00000561065 MAT2AP31153 395 aaKnown RBP16.31■□□□□ 0.2
LMX1B-204ENST00000561065 SERPINH1P50454 418 aaKnown RBP16.31■□□□□ 0.2
LMX1B-204ENST00000561065 CLCN6P51797 869 aa16.31■□□□□ 0.2
LMX1B-204ENST00000561065 GNA12Q03113 381 aa16.31■□□□□ 0.2
LMX1B-204ENST00000561065 FAM46CQ5VWP2 391 aa16.31■□□□□ 0.2
LMX1B-204ENST00000561065 E4F1Q66K89 784 aaPredicted RBP16.31■□□□□ 0.2
LMX1B-204ENST00000561065 ACAD10Q6JQN1 1059 aa16.31■□□□□ 0.2
LMX1B-204ENST00000561065 WDR59Q6PJI9 974 aa16.31■□□□□ 0.2
LMX1B-204ENST00000561065 IRF2BP2Q7Z5L9 587 aa16.31■□□□□ 0.2
LMX1B-204ENST00000561065 GRIN3AQ8TCU5 1115 aa16.31■□□□□ 0.2
LMX1B-204ENST00000561065 SYN2Q92777 582 aaPredicted RBP16.31■□□□□ 0.2
LMX1B-204ENST00000561065 SERAC1Q96JX3 654 aa16.31■□□□□ 0.2
LMX1B-204ENST00000561065 ATP13A1Q9HD20 1204 aa16.31■□□□□ 0.2
LMX1B-204ENST00000561065 AASDHPPTQ9NRN7 309 aa16.31■□□□□ 0.2
LMX1B-204ENST00000561065 TAS2R14Q9NYV8 317 aa16.31■□□□□ 0.2
LMX1B-204ENST00000561065 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.31■□□□□ 0.2
LMX1B-204ENST00000561065 LAMA5O15230 3695 aa16.31■□□□□ 0.2
LMX1B-204ENST00000561065 TBC1D3DA0A087WVF3 549 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 TBC1D3IA0A087WXS9 549 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 TBC1D3EA0A087X179 549 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 TBC1D3KA0A087X1G2 549 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 A0A1B0GTQ1 180 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 A0A1W2PQJ5 194 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 TBC1D3FA6NER0 549 aaPredicted RBP16.3■□□□□ 0.2
LMX1B-204ENST00000561065 SIGLEC16A6NMB1 481 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 TBC1D3LB9A6J9 549 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 PCDHGA12O60330 932 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 DKK1O94907 266 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 TPM1P09493 284 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 TBC1D3HP0C7X1 549 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 GZMAP12544 262 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 GPD1P21695 349 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 CD38P28907 300 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 CHRNA3P32297 505 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 C21orf59P57076 290 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 RPL7AP62424 266 aaKnown RBP16.3■□□□□ 0.2
LMX1B-204ENST00000561065 KLHL30Q0D2K2 578 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 TSR1Q2NL82 804 aaKnown RBP16.3■□□□□ 0.2
LMX1B-204ENST00000561065 PPP1R15BQ5SWA1 713 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 TBC1D3GQ6DHY5 549 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 TBC1D3CQ6IPX1 549 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 NAPEPLDQ6IQ20 393 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 DCUN1D2Q6PH85 259 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 ZNF783Q6ZMS7 281 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 DPY19L3Q6ZPD9 716 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 TRIM69Q86WT6 500 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 TBC1D3Q8IZP1 549 aaPredicted RBP16.3■□□□□ 0.2
LMX1B-204ENST00000561065 PYROXD2Q8N2H3 581 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 ADAMTS14Q8WXS8 1223 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 VOPP1Q96AW1 172 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 TRIM11Q96F44 468 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 MCEEQ96PE7 176 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 SPON2Q9BUD6 331 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 OSBPL2Q9H1P3 480 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 KDM4CQ9H3R0 1056 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 TSPY26PQ9H489 355 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 OR12D3Q9UGF7 316 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 CA5BQ9Y2D0 317 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 FCF1Q9Y324 198 aaKnown RBP16.3■□□□□ 0.2
LMX1B-204ENST00000561065 LUC7L2Q9Y383 392 aaKnown RBP16.3■□□□□ 0.2
LMX1B-204ENST00000561065 MSRB2Q9Y3D2 182 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 PCDHB9Q9Y5E1 797 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 WASF2Q9Y6W5 498 aa16.3■□□□□ 0.2
LMX1B-204ENST00000561065 LRRC53A6NM62 1247 aa16.29■□□□□ 0.2
LMX1B-204ENST00000561065 KPNA3O00505 521 aaPredicted RBP16.29■□□□□ 0.2
LMX1B-204ENST00000561065 TRIM16O95361 564 aa16.29■□□□□ 0.2
LMX1B-204ENST00000561065 ATXN1LP0C7T5 689 aaKnown RBP16.29■□□□□ 0.2
LMX1B-204ENST00000561065 NXPH1P58417 271 aa16.29■□□□□ 0.2
LMX1B-204ENST00000561065 OGDHQ02218 1023 aa16.29■□□□□ 0.2
LMX1B-204ENST00000561065 SCAPQ12770 1279 aa16.29■□□□□ 0.2
LMX1B-204ENST00000561065 DNAJC24Q6P3W2 148 aa16.29■□□□□ 0.2
LMX1B-204ENST00000561065 SPATS2Q86XZ4 545 aaKnown RBP16.29■□□□□ 0.2
LMX1B-204ENST00000561065 DNAAF5Q86Y56 855 aa16.29■□□□□ 0.2
LMX1B-204ENST00000561065 GATAD2AQ86YP4 633 aa16.29■□□□□ 0.2
LMX1B-204ENST00000561065 NTAN1Q96AB6 310 aa16.29■□□□□ 0.2
LMX1B-204ENST00000561065 ELF4Q99607 663 aaPredicted RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms