RNA–Protein interactions for RNA: ENST00000561055.1

RABGGTA-221, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-221ENST00000561055 ZBTB24O43167 697 aaPredicted RBP9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 ZSCAN12O43309 604 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 ZNF217O75362 1048 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 PEX11BO96011 259 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 KRT1P04264 644 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 CCNCP24863 283 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 P2RY2P41231 377 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 GARSP41250 739 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 NBL1P41271 181 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 CSNK1DP48730 415 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 MARCKSL1P49006 195 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 FNTBP49356 437 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 RWDD2BP57060 319 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 RPS14P62263 151 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 SLC10A2Q12908 348 aaPredicted RBP9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 BYSLQ13895 437 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 ELAVL3Q14576 367 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 ODF2Q5BJF6 829 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 ZFYVE27Q5T4F4 411 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 MEI1Q5TIA1 1274 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 ANO7Q6IWH7 933 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 ZC3H14Q6PJT7 736 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 LINGO4Q6UY18 593 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 TP53INP2Q8IXH6 220 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 UBL4BQ8N7F7 174 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 ZNF366Q8N895 744 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 TRIM58Q8NG06 486 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 OR2A12Q8NGT7 310 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 ALG3Q92685 438 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 FAM131CQ96AQ9 280 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 VOPP1Q96AW1 172 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 HDAC11Q96DB2 347 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 CELF6Q96J87 481 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 CCDC114Q96M63 670 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 MAK16Q9BXY0 300 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 SEMA4AQ9H3S1 761 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 MTG2Q9H4K7 406 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 LZTFL1Q9NQ48 299 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 ITM2CQ9NQX7 267 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 DTLQ9NZJ0 730 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 USP36Q9P275 1121 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 IPO11Q9UI26 975 aaKnown RBP9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 PPM1HQ9ULR3 514 aa9.81□□□□□ -0.84
RABGGTA-221ENST00000561055 PROB1E7EW31 1015 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 APOL1O14791 398 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 HRO43593 1189 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 MFSD11O43934 449 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 RNASEH1O60930 286 aaKnown RBP9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 TMCC1O94876 653 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 GSRP00390 522 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 TNNT1P13805 278 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 VAV1P15498 845 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 MX2P20592 715 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 TGM2P21980 687 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 NR2C2P49116 596 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 NUMBP49757 651 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 NSUN2Q08J23 767 aaKnown RBP eCLIP9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 HNRNPDQ14103 355 aaKnown RBP9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 CYTH1Q15438 398 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 MAP7D1Q3KQU3 841 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 ACCSLQ4AC99 568 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 USP39Q53GS9 565 aaKnown RBP9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 CARD16Q5EG05 197 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 ZNF776Q68DI1 518 aaPredicted RBP9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 TIGD7Q6NT04 549 aaPredicted RBP9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 Q6ZVU0 165 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 BBS12Q6ZW61 710 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 USP30Q70CQ3 517 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 BZW1Q7L1Q6 419 aaKnown RBP9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 DSG4Q86SJ6 1040 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 C11orf74Q86VG3 221 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 STK40Q8N2I9 435 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 TEX26Q8N6G2 289 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 TMIEQ8NEW7 156 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 OR2AP1Q8NGE2 309 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 HMGB4Q8WW32 186 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 GAB3Q8WWW8 586 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 OR8D1Q8WZ84 308 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 PRCCQ92733 491 aaPredicted RBP9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 SIPA1Q96FS4 1042 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 LRIG1Q96JA1 1093 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 ZC3H10Q96K80 434 aaKnown RBP9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 ZNF830Q96NB3 372 aaPredicted RBP9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 OLFM3Q96PB7 478 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 PSKH2Q96QS6 385 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 BRD8Q9H0E9 1235 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 KCND1Q9NSA2 647 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 UBA2Q9UBT2 640 aaPredicted RBP9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 AMACRQ9UHK6 382 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 FARP1Q9Y4F1 1045 aaPredicted RBP9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 ACTL7AQ9Y615 435 aa9.8□□□□□ -0.84
RABGGTA-221ENST00000561055 PLXNA2O75051 1894 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 C10orf142B7Z368 130 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 DFFAO00273 331 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 CST8O60676 142 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 FTCDO95954 541 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 ADH1BP00325 375 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 PRNPP04156 253 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 PYGMP11217 842 aa9.79□□□□□ -0.84
RABGGTA-221ENST00000561055 KRT10P13645 584 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms