RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 ARSIQ5FYB1 569 aa16.57■□□□□ 0.24
SNX1-213ENST00000561026 SFMBT2Q5VUG0 894 aa16.57■□□□□ 0.24
SNX1-213ENST00000561026 C22orf39Q6P5X5 142 aa16.57■□□□□ 0.24
SNX1-213ENST00000561026 DPY19L3Q6ZPD9 716 aa16.57■□□□□ 0.24
SNX1-213ENST00000561026 TMPRSS12Q86WS5 348 aa16.57■□□□□ 0.24
SNX1-213ENST00000561026 TMEM145Q8NBT3 493 aa16.57■□□□□ 0.24
SNX1-213ENST00000561026 HDAC8Q9BY41 377 aa16.57■□□□□ 0.24
SNX1-213ENST00000561026 TNKS2Q9H2K2 1166 aa16.57■□□□□ 0.24
SNX1-213ENST00000561026 ATP13A1Q9HD20 1204 aa16.57■□□□□ 0.24
SNX1-213ENST00000561026 DYRK4Q9NR20 520 aa16.57■□□□□ 0.24
SNX1-213ENST00000561026 FANCLQ9NW38 375 aa16.57■□□□□ 0.24
SNX1-213ENST00000561026 DKK4Q9UBT3 224 aa16.57■□□□□ 0.24
SNX1-213ENST00000561026 IL36AQ9UHA7 158 aa16.57■□□□□ 0.24
SNX1-213ENST00000561026 CA5BQ9Y2D0 317 aa16.57■□□□□ 0.24
SNX1-213ENST00000561026 CACNA1GO43497 2377 aa16.57■□□□□ 0.24
SNX1-213ENST00000561026 COL5A1P20908 1838 aaPredicted RBP16.56■□□□□ 0.24
SNX1-213ENST00000561026 TP53BP1Q12888 1972 aaPredicted RBP16.56■□□□□ 0.24
SNX1-213ENST00000561026 A0A1W2PQU0 124 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 SLC31A1O15431 190 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 C1SP09871 688 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 CDK4P11802 303 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 ADRA1BP35368 520 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 SERPINH1P50454 418 aaKnown RBP16.56■□□□□ 0.24
SNX1-213ENST00000561026 DNAJC3Q13217 504 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 ZNF284Q2VY69 593 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 RAB6CQ53S08 254 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 FKBP15Q5T1M5 1219 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 RBM43Q6ZSC3 357 aaKnown RBP16.56■□□□□ 0.24
SNX1-213ENST00000561026 ERN2Q76MJ5 926 aaKnown RBP16.56■□□□□ 0.24
SNX1-213ENST00000561026 KANSL1Q7Z3B3 1105 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 PHLDB2Q86SQ0 1253 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 HORMAD1Q86X24 394 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 SLC30A5Q8TAD4 765 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 GRIN3AQ8TCU5 1115 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 RXFP2Q8WXD0 754 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 TSC1Q92574 1164 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 KLHDC7BQ96G42 594 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 CEP44Q9C0F1 390 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 RAB6CQ9H0N0 254 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 NLRC4Q9NPP4 1024 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 OR12D3Q9UGF7 316 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 LHX6Q9UPM6 363 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 DAAM1Q9Y4D1 1078 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 GPSM3Q9Y4H4 160 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 NBEAQ8NFP9 2946 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 DOCK9Q9BZ29 2069 aa16.56■□□□□ 0.24
SNX1-213ENST00000561026 LEFTY1O75610 366 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 PRLRP16471 622 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 SDC4P31431 198 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 STAT1P42224 750 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 ARF5P84085 180 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 NRG1Q02297 640 aaPredicted RBP16.55■□□□□ 0.24
SNX1-213ENST00000561026 ITPR1Q14643 2758 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 CDO1Q16878 200 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 C15orf59Q2T9L4 293 aaPredicted RBP16.55■□□□□ 0.24
SNX1-213ENST00000561026 ARL13BQ3SXY8 428 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 MANEALQ5VSG8 457 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 TRIM72Q6ZMU5 477 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 DRC7Q8IY82 874 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 PCDH20Q8N6Y1 951 aaKnown RBP16.55■□□□□ 0.24
SNX1-213ENST00000561026 PDCD7Q8N8D1 485 aaKnown RBP16.55■□□□□ 0.24
SNX1-213ENST00000561026 GPT2Q8TD30 523 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 KLK6Q92876 244 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 PPP1R16AQ96I34 528 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 C11orf70Q9BRQ4 267 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 OSBPL2Q9H1P3 480 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 RETREG1Q9H6L5 497 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 SIK3Q9Y2K2 1263 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 WASF2Q9Y6W5 498 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 ARID1BQ8NFD5 2236 aaPredicted RBP16.55■□□□□ 0.24
SNX1-213ENST00000561026 DOCK4Q8N1I0 1966 aa16.55■□□□□ 0.24
SNX1-213ENST00000561026 CXorf51AA0A1B0GTR3 108 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 C2CD4BA6NLJ0 364 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 RFPL3O75679 317 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 PCDH8O95206 1070 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 CD160O95971 181 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 UNGP13051 313 aaPredicted RBP16.54■□□□□ 0.24
SNX1-213ENST00000561026 PTPN9P43378 593 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 ACADVLP49748 655 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 DNA2P51530 1060 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 CYP4F3Q08477 520 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 PTP4A2Q12974 167 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 CARD16Q5EG05 197 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 STRADAQ7RTN6 431 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 JOSD2Q8TAC2 188 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 CENPIQ92674 756 aaPredicted RBP16.54■□□□□ 0.24
SNX1-213ENST00000561026 PCDHB18PQ96TA0 734 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 MYOCQ99972 504 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 HEPHQ9BQS7 1158 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 ZFR2Q9UPR6 939 aaKnown RBP16.54■□□□□ 0.24
SNX1-213ENST00000561026 RAXQ9Y2V3 346 aa16.54■□□□□ 0.24
SNX1-213ENST00000561026 THEGLP0DJG4 465 aa16.53■□□□□ 0.24
SNX1-213ENST00000561026 KRT3P12035 628 aa16.53■□□□□ 0.24
SNX1-213ENST00000561026 JUPP14923 745 aa16.53■□□□□ 0.24
SNX1-213ENST00000561026 RHOQP17081 205 aa16.53■□□□□ 0.24
SNX1-213ENST00000561026 HNRNPA2B1P22626 353 aaKnown RBP16.53■□□□□ 0.24
SNX1-213ENST00000561026 ITGB7P26010 798 aa16.53■□□□□ 0.24
SNX1-213ENST00000561026 AKT2P31751 481 aa16.53■□□□□ 0.24
SNX1-213ENST00000561026 ACVRL1P37023 503 aa16.53■□□□□ 0.24
SNX1-213ENST00000561026 ETFBP38117 255 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms