RNA–Protein interactions for RNA: ENST00000560620.1

CTDSPL2-209, Transcript of CTD small phosphatase like 2, humanhuman

TSL 3

Gene CTDSPL2, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-209ENST00000560620 OR2A12Q8NGT7 310 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 OR2T34Q8NGX1 318 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 DNASE2BQ8WZ79 361 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 HSPH1Q92598 858 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 ACE2Q9BYF1 805 aaPredicted RBP13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 TM6SF2Q9BZW4 377 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 ZWILCHQ9H900 591 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 ABHD10Q9NUJ1 306 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 DONSONQ9NYP3 566 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 CTTNBP2NLQ9P2B4 639 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 IL36AQ9UHA7 158 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 SARDHQ9UL12 918 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 PPM1HQ9ULR3 514 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 NEU3Q9UQ49 428 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 ACTL7AQ9Y615 435 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 DCHS1Q96JQ0 3298 aa13.24□□□□□ -0.29
CTDSPL2-209ENST00000560620 CEP250Q9BV73 2442 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 MYO1FO00160 1098 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 CDX4O14627 284 aaPredicted RBP13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 LRCH4O75427 683 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 HNRNPH3P31942 346 aaKnown RBP13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 HTR7P34969 479 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 DRD3P35462 400 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 CSNK1EP49674 416 aaKnown RBP13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 AFF3P51826 1226 aaKnown RBP13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 ADPRHP54922 357 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 CCDC15Q0P6D6 951 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 PIGHQ14442 188 aaPredicted RBP13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 ACAP1Q15027 740 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 TEAD4Q15561 434 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 CA9Q16790 459 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 SMTNL2Q2TAL5 461 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 ARSIQ5FYB1 569 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 PPM1JQ5JR12 505 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 DPY19L3Q6ZPD9 716 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 MINDY1Q8N5J2 469 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 ARFGAP1Q8N6T3 406 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 PCDH20Q8N6Y1 951 aaKnown RBP13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 CHST14Q8NCH0 376 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 OR2I1PQ8NGU4 316 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 CTNNBL1Q8WYA6 563 aaPredicted RBP13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 PPP1R16AQ96I34 528 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 BTBD6Q96KE9 485 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 CCDC42Q96M95 316 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 PEBP4Q96S96 227 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 DNAJC7Q99615 494 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 CEP44Q9C0F1 390 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 ZDHHC6Q9H6R6 413 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 CAPN10Q9HC96 672 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 IP6K2Q9UHH9 426 aa13.23□□□□□ -0.29
CTDSPL2-209ENST00000560620 ZSCAN5CA6NGD5 496 aaPredicted RBP13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 EIF3CLB5ME19 914 aaKnown RBP13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 RASA4BC9J798 803 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 AKR1B15C9JRZ8 316 aaPredicted RBP13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 KRIT1O00522 736 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 RASA4O43374 803 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 KDELR3O43731 214 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 OPHN1O60890 802 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 MFAP3LO75121 409 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 LEFTY1O75610 366 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 ZMPSTE24O75844 475 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 C7P10643 843 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 CD27P26842 260 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 PCK1P35558 622 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 GJC1P36383 396 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 ARL4AP40617 200 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 CCNHP51946 323 aaPredicted RBP13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 YBEYP58557 167 aaPredicted RBP13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 CNTN1Q12860 1018 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 SEMA3BQ13214 749 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 SLC18A3Q16572 532 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 PARP15Q460N3 678 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 CARD16Q5EG05 197 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 KCNT1Q5JUK3 1230 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 RFX8Q6ZV50 586 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 CNGA4Q8IV77 575 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 TMIEQ8NEW7 156 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 OR6K2Q8NGY2 324 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 ARHGEF26Q96DR7 871 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 HMCESQ96FZ2 354 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 CELF6Q96J87 481 aaKnown RBP13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 KCTD15Q96SI1 283 aaPredicted RBP13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 EIF3CQ99613 913 aaKnown RBP13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 HEPHQ9BQS7 1158 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 TM9SF3Q9HD45 589 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 AASDHPPTQ9NRN7 309 aa13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 HECAQ9UBI9 543 aaPredicted RBP13.22□□□□□ -0.29
CTDSPL2-209ENST00000560620 A0A1B0GVT2 93 aa13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 DFFAO00273 331 aa13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 SLC7A4O43246 635 aa13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 CYP1A2P05177 515 aa13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 IGHV4-34P06331 123 aa13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 CTSLP07711 333 aa13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 H2AFZP0C0S5 128 aa13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 MAT2AP31153 395 aaKnown RBP13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 RHOAP61586 193 aa13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 SNRPD1P62314 119 aaKnown RBP13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 GRIK2Q13002 908 aa13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 SERINC3Q13530 473 aa13.21□□□□□ -0.29
CTDSPL2-209ENST00000560620 BOLA3Q53S33 107 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms