RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 POPDC2Q9HBU9 364 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 MAGEE1Q9HCI5 957 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 PREBQ9HCU5 417 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 ACP6Q9NPH0 428 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 ETNK2Q9NVF9 386 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 LMCD1Q9NZU5 365 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 SEPT3Q9UH03 358 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 PADI3Q9ULW8 664 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 USP18Q9UMW8 372 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 SLC8A2Q9UPR5 921 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 MYRFQ9Y2G1 1151 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 ANKRD6Q9Y2G4 727 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 INPP5FQ9Y2H2 1132 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 TTLL3Q9Y4R7 772 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 PCDHB12Q9Y5F1 795 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 BRWD1Q9NSI6 2320 aa8.71□□□□□ -1.02
CCDC33-209ENST00000560565 MYO7AQ13402 2215 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 MAGEB16A2A368 324 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 LCHNA4D1U4 455 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 TRPC5OSA6NMA1 111 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 E9PBE3 544 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 PIK3R2O00459 728 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 DPYSL4O14531 572 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 TIMM44O43615 452 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 ENDOD1O94919 500 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 HSPA4LO95757 839 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 TRUB2O95900 331 aaKnown RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 CAPNS1P04632 268 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 ETS1P14921 441 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 PGAM1P18669 254 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 GPD1P21695 349 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 IGFBP4P22692 258 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 PEX2P28328 305 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 SPRP35270 261 aaPredicted RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 TNFSF9P41273 254 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 CD97P48960 835 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 EPHB1P54762 984 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 RPL7AP62424 266 aaKnown RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 DYNLT1P63172 113 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 ZBTB17Q13105 803 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 STX5Q13190 355 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 ART3Q13508 389 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 APOFQ13790 326 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 TMEM132DQ14C87 1099 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 EFTUD2Q15029 972 aaKnown RBP eCLIP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 KCTD21Q4G0X4 260 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 CCDC92Q53HC0 331 aaPredicted RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 HP1BP3Q5SSJ5 553 aaPredicted RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 SYCP2LQ5T4T6 812 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 ANKRD22Q5VYY1 191 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 MBLAC2Q68D91 279 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 NEK10Q6ZWH5 1172 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 FRA10AC1Q70Z53 315 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 PATL1Q86TB9 770 aaKnown RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 ZNF354CQ86Y25 554 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 PSTKQ8IV42 348 aaKnown RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 BBS5Q8N3I7 341 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 CPSF7Q8N684 471 aaKnown RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 ZNF513Q8N8E2 541 aaPredicted RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 PDPRQ8NCN5 879 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 PHC3Q8NDX5 983 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 TSPAN14Q8NG11 270 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 FNDC8Q8TC99 324 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 ADAMTS19Q8TE59 1207 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 PDCD6IPQ8WUM4 868 aaKnown RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 PYDC1Q8WXC3 89 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 ARNTL2Q8WYA1 636 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 BORCS5Q969J3 196 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 NMD3Q96D46 503 aaKnown RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 CPB2Q96IY4 423 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 ZNF668Q96K58 619 aaPredicted RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 CNDP2Q96KP4 475 aaKnown RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 PPP1R16BQ96T49 567 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 YME1L1Q96TA2 773 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 KLF6Q99612 283 aaPredicted RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 CCT7Q99832 543 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 FAM118BQ9BPY3 351 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 DDX50Q9BQ39 737 aaKnown RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 PI4K2AQ9BTU6 479 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 CALN1Q9BXU9 219 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 SLC13A1Q9BZW2 595 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 ILKAPQ9H0C8 392 aaPredicted RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 CDH19Q9H159 772 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 SNX25Q9H3E2 840 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 CERS4Q9HA82 394 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 CDHR5Q9HBB8 845 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 ALG13Q9NP73 1137 aaKnown RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 CISHQ9NSE2 258 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 UBAP1Q9NZ09 502 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 CLIC5Q9NZA1 410 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 TMEM9Q9P0T7 183 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 IGSF9Q9P2J2 1179 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 RCOR3Q9P2K3 495 aaPredicted RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 RAD54BQ9Y620 910 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 AP4B1Q9Y6B7 739 aa8.7□□□□□ -1.02
CCDC33-209ENST00000560565 FNDC1Q4ZHG4 1894 aaPredicted RBP8.7□□□□□ -1.02
CCDC33-209ENST00000560565 XIRP2A4UGR9 3374 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 SH3PXD2BA1X283 911 aa8.69□□□□□ -1.02
CCDC33-209ENST00000560565 ERI2A8K979 691 aaKnown RBP8.69□□□□□ -1.02
CCDC33-209ENST00000560565 LACTBL1A8MY62 500 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms